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Publisher Correction: Exome sequencing in amyotrophic lateral sclerosis implicates a novel gene, DNAJC7, encoding a heat-shock protein.
Farhan SMK, Howrigan DP, Abbott LE, Klim JR, Topp SD, Byrnes AE, Churchhouse C, Phatnani H, Smith BN, Rampersaud E, Wu G, Wuu J, Shatunov A, Iacoangeli A, Khleifat AA, Mordes DA, Ghosh S; ALSGENS Consortium; FALS Consortium; Project MinE Consortium; CReATe Consortium; Eggan K, Rademakers R, McCauley JL, Schüle R, Züchner S, Benatar M, Taylor JP, Nalls M, Gotkine M, Shaw PJ, Morrison KE, Al-Chalabi A, Traynor B, Shaw CE, Goldstein DB, Harms MB, Daly MJ, Neale BM. Farhan SMK, et al. Among authors: khleifat aa. Nat Neurosci. 2020 Feb;23(2):295. doi: 10.1038/s41593-019-0570-5. Nat Neurosci. 2020. PMID: 31857710
Cross-reactive probes on Illumina DNA methylation arrays: a large study on ALS shows that a cautionary approach is warranted in interpreting epigenome-wide association studies.
Hop PJ, Zwamborn RAJ, Hannon EJ, Dekker AM, van Eijk KR, Walker EM, Iacoangeli A, Jones AR, Shatunov A, Khleifat AA, Opie-Martin S, Shaw CE, Morrison KE, Shaw PJ, McLaughlin RL, Hardiman O, Al-Chalabi A, Van Den Berg LH, Mill J, Veldink JH. Hop PJ, et al. Among authors: khleifat aa. NAR Genom Bioinform. 2020 Dec 17;2(4):lqaa105. doi: 10.1093/nargab/lqaa105. eCollection 2020 Dec. NAR Genom Bioinform. 2020. PMID: 33554115 Free PMC article.
Stage of prolonged survival in ALS - Author's reply.
Al-Chalabi A, Fang T, Khleifat AA, Meurgey JH, Jones A, Leigh PN, Bensimon G. Al-Chalabi A, et al. Among authors: khleifat aa. Lancet Neurol. 2018 Jul;17(7):579-580. doi: 10.1016/S1474-4422(18)30208-4. Lancet Neurol. 2018. PMID: 29914702 No abstract available.
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
Walker K, Kalra D, Lowdon R, Chen G, Molik D, Soto DC, Dabbaghie F, Khleifat AA, Mahmoud M, Paulin LF, Raza MS, Pfeifer SP, Agustinho DP, Aliyev E, Avdeyev P, Barrozo ER, Behera S, Billingsley K, Chong LC, Choubey D, De Coster W, Fu Y, Gener AR, Hefferon T, Henke DM, Höps W, Illarionova A, Jochum MD, Jose M, Kesharwani RK, Kolora SRR, Kubica J, Lakra P, Lattimer D, Liew CS, Lo BW, Lo C, Lötter A, Majidian S, Mendem SK, Mondal R, Ohmiya H, Parvin N, Peralta C, Poon CL, Prabhakaran R, Saitou M, Sammi A, Sanio P, Sapoval N, Syed N, Treangen T, Wang G, Xu T, Yang J, Zhang S, Zhou W, Sedlazeck FJ, Busby B. Walker K, et al. Among authors: khleifat aa. F1000Res. 2022 May 16;11:530. doi: 10.12688/f1000research.110194.1. eCollection 2022. F1000Res. 2022. PMID: 36262335 Free PMC article.
Unsupervised machine learning identifies distinct ALS molecular subtypes in post-mortem motor cortex and blood expression data.
Marriott H, Kabiljo R, Hunt GP, Khleifat AA, Jones A, Troakes C; Project MinE ALS Sequencing Consortium; TargetALS Sequencing Consortium; Pfaff AL, Quinn JP, Koks S, Dobson RJ, Schwab P, Al-Chalabi A, Iacoangeli A. Marriott H, et al. Among authors: khleifat aa. Acta Neuropathol Commun. 2023 Dec 21;11(1):208. doi: 10.1186/s40478-023-01686-8. Acta Neuropathol Commun. 2023. PMID: 38129934 Free PMC article.
Artificial intelligence for biomarker discovery in Alzheimer's disease and dementia.
Winchester LM, Harshfield EL, Shi L, Badhwar A, Khleifat AA, Clarke N, Dehsarvi A, Lengyel I, Lourida I, Madan CR, Marzi SJ, Proitsi P, Rajkumar AP, Rittman T, Silajdžić E, Tamburin S, Ranson JM, Llewellyn DJ. Winchester LM, et al. Among authors: khleifat aa. Alzheimers Dement. 2023 Dec;19(12):5860-5871. doi: 10.1002/alz.13390. Epub 2023 Aug 31. Alzheimers Dement. 2023. PMID: 37654029 Review.
Artificial intelligence for dementia research methods optimization.
Bucholc M, James C, Khleifat AA, Badhwar A, Clarke N, Dehsarvi A, Madan CR, Marzi SJ, Shand C, Schilder BM, Tamburin S, Tantiangco HM; Deep Dementia Phenotyping (DEMON) Network; Lourida I, Llewellyn DJ, Ranson JM. Bucholc M, et al. Among authors: khleifat aa. Alzheimers Dement. 2023 Dec;19(12):5934-5951. doi: 10.1002/alz.13441. Epub 2023 Aug 28. Alzheimers Dement. 2023. PMID: 37639369 Free article. Review.
Artificial intelligence for dementia drug discovery and trials optimization.
Doherty T, Yao Z, Khleifat AAL, Tantiangco H, Tamburin S, Albertyn C, Thakur L, Llewellyn DJ, Oxtoby NP, Lourida I; Deep Dementia Phenotyping (DEMON) Network; Ranson JM, Duce JA. Doherty T, et al. Among authors: khleifat aal. Alzheimers Dement. 2023 Dec;19(12):5922-5933. doi: 10.1002/alz.13428. Epub 2023 Aug 16. Alzheimers Dement. 2023. PMID: 37587767 Free article. Review.
Unexpected frequency of the pathogenic AR CAG repeat expansion in the general population.
Zanovello M, Ibáñez K, Brown AL, Sivakumar P, Bombaci A, Santos L, van Vugt JJFA, Narzisi G, Karra R, Scholz SW, Ding J, Gibbs JR, Chiò A, Dalgard C, Weisburd B; American Genome Center (TAGC) consortium, Genomics England Research Consortium, Project MinE ALS Sequencing Consortium, The NYGC ALS Consortium; Hanna MG, Greensmith L, Phatnani H, Veldink JH, Traynor BJ, Polke J, Houlden H, Fratta P, Tucci A. Zanovello M, et al. Brain. 2023 Jul 3;146(7):2723-2729. doi: 10.1093/brain/awad050. Brain. 2023. PMID: 36797998 Free PMC article.