Kim M - Search Results

1

Impact of mutations in highly conserved amino acids of the HIV-1 Gag-p24 and Env-gp120 proteins on viral replication in different genetic backgrounds.

Liu Y, Rao U, McClure J, Konopa P, Manocheewa S, Kim M, Chen L, Troyer RM, Tebit DM, Holte S, Arts EJ, Mullins JI. Liu Y, et al. Among authors: kim m. PLoS One. 2014 Apr 8;9(4):e94240. doi: 10.1371/journal.pone.0094240. eCollection 2014. PLoS One. 2014. PMID: 24713822 Free PMC article.

2

A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture.

Liu Y, Holte S, Rao U, McClure J, Konopa P, Swain JV, Lanxon-Cookson E, Kim M, Chen L, Mullins JI. Liu Y, et al. Among authors: kim m. J Virol Methods. 2013 Apr;189(1):157-66. doi: 10.1016/j.jviromet.2012.10.016. Epub 2012 Nov 29. J Virol Methods. 2013. PMID: 23201292 Free PMC article.

3

HIV-1 conserved-element vaccines: relationship between sequence conservation and replicative capacity.

Rolland M, Manocheewa S, Swain JV, Lanxon-Cookson EC, Kim M, Westfall DH, Larsen BB, Gilbert PB, Mullins JI. Rolland M, et al. Among authors: kim m. J Virol. 2013 May;87(10):5461-7. doi: 10.1128/JVI.03033-12. Epub 2013 Mar 6. J Virol. 2013. PMID: 23468488 Free PMC article.

4

Factors affecting relative fitness measurements in pairwise competition assays of human immunodeficiency viruses.

Lanxon-Cookson EC, Swain JV, Manocheewa S, Smith RA, Maust B, Kim M, Westfall D, Rolland M, Mullins JI. Lanxon-Cookson EC, et al. Among authors: kim m. J Virol Methods. 2013 Dec;194(1-2):7-13. doi: 10.1016/j.jviromet.2013.07.062. Epub 2013 Aug 8. J Virol Methods. 2013. PMID: 23933395 Free PMC article.

5

Improved detection of rare HIV-1 variants using 454 pyrosequencing.

Larsen BB, Chen L, Maust BS, Kim M, Zhao H, Deng W, Westfall D, Beck I, Frenkel LM, Mullins JI. Larsen BB, et al. Among authors: kim m. PLoS One. 2013 Oct 2;8(10):e76502. doi: 10.1371/journal.pone.0076502. eCollection 2013. PLoS One. 2013. PMID: 24098517 Free PMC article.

6

Increased sequence coverage through combined targeting of variant and conserved epitopes correlates with control of HIV replication.

Sunshine J, Kim M, Carlson JM, Heckerman D, Czartoski J, Migueles SA, Maenza J, McElrath MJ, Mullins JI, Frahm N. Sunshine J, et al. Among authors: kim m. J Virol. 2014 Jan;88(2):1354-65. doi: 10.1128/JVI.02361-13. Epub 2013 Nov 13. J Virol. 2014. PMID: 24227851 Free PMC article.

7

Pairwise growth competition assay for determining the replication fitness of human immunodeficiency viruses.

Manocheewa S, Lanxon-Cookson EC, Liu Y, Swain JV, McClure J, Rao U, Maust B, Deng W, Sunshine JE, Kim M, Rolland M, Mullins JI. Manocheewa S, et al. Among authors: kim m. J Vis Exp. 2015 May 4;(99):e52610. doi: 10.3791/52610. J Vis Exp. 2015. PMID: 25993602 Free PMC article.

8

Comparison of Major and Minor Viral SNPs Identified through Single Template Sequencing and Pyrosequencing in Acute HIV-1 Infection.

Iyer S, Casey E, Bouzek H, Kim M, Deng W, Larsen BB, Zhao H, Bumgarner RE, Rolland M, Mullins JI. Iyer S, et al. Among authors: kim m. PLoS One. 2015 Aug 28;10(8):e0135903. doi: 10.1371/journal.pone.0135903. eCollection 2015. PLoS One. 2015. PMID: 26317928 Free PMC article.

9

Fitness-Balanced Escape Determines Resolution of Dynamic Founder Virus Escape Processes in HIV-1 Infection.

Sunshine JE, Larsen BB, Maust B, Casey E, Deng W, Chen L, Westfall DH, Kim M, Zhao H, Ghorai S, Lanxon-Cookson E, Rolland M, Collier AC, Maenza J, Mullins JI, Frahm N. Sunshine JE, et al. Among authors: kim m. J Virol. 2015 Oct;89(20):10303-18. doi: 10.1128/JVI.01876-15. Epub 2015 Jul 29. J Virol. 2015. PMID: 26223634 Free PMC article.

10

HIV-2 integrase variation in integrase inhibitor-naïve adults in Senegal, West Africa.

Gottlieb GS, Smith RA, Dia Badiane NM, Ba S, Hawes SE, Toure M, Starling AK, Traore F, Sall F, Cherne SL, Stern J, Wong KG, Lu P, Kim M, Raugi DN, Lam A, Mullins JI, Kiviat NB; Papa Salif Sow for the UW-Dakar HIV-2 Study Group. Gottlieb GS, et al. Among authors: kim m. PLoS One. 2011;6(7):e22204. doi: 10.1371/journal.pone.0022204. Epub 2011 Jul 12. PLoS One. 2011. PMID: 21765953 Free PMC article.

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