Kaistella koreensis gen. nov., sp. nov., a novel member of the Chryseobacterium-Bergeyella-Riemerella branch

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2319-2324. doi: 10.1099/ijs.0.02998-0.

Abstract

Gram-negative, non-spore-forming, rod-shaped, yellow-pigmented bacteria isolated from a freshwater stream in Korea were investigated to determine their taxonomic position. Complete 16S rRNA gene sequence analysis indicated that the organisms should be placed in the Chryseobacterium-Bergeyella-Riemerella branch in the family Flavobacteriaceae. Phylogenetically, the strains were most closely related to Chryseobacterium balustinum ATCC 33487(T) and Chryseobacterium scophthalmum LMG 13028(T) (94.3 and 94.1 % 16S rRNA gene sequence similarity, respectively) and they clustered on a separate well-supported branch. The strains contained menaquinone MK-6 as the predominant respiratory quinone and showed higher G+C contents (41.7 mol%) than other species in the Chryseobacterium-Bergeyella-Riemerella branch and i-C(15 : 0) as a major fatty acid (47-52 %). The phylogenetic distances from any species with validly published names and their phenotypic properties confirmed that the strains constitute a separate species in a new genus, for which the name Kaistella koreensis gen. nov., sp. nov. is proposed (type strain Chj707(T)=KCTC 12107(T)=IAM 15050(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Chryseobacterium / genetics
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Fatty Acids / analysis
  • Fatty Acids / isolation & purification
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / cytology
  • Flavobacteriaceae / isolation & purification*
  • Flavobacteriaceae / physiology
  • Fresh Water / microbiology*
  • Genes, rRNA
  • Gentian Violet
  • Korea
  • Molecular Sequence Data
  • Phenazines
  • Phylogeny
  • Pigments, Biological
  • Quinones / analysis
  • Quinones / isolation & purification
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Spores, Bacterial
  • Water Microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Gram's stain
  • Phenazines
  • Pigments, Biological
  • Quinones
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Gentian Violet

Associated data

  • GENBANK/AF344179
  • GENBANK/AY294611
  • GENBANK/AY299974