Kinoshita K - Search Results

1

PrDOS: prediction of disordered protein regions from amino acid sequence.

Ishida T, Kinoshita K. Ishida T, et al. Among authors: kinoshita k. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W460-4. doi: 10.1093/nar/gkm363. Epub 2007 Jun 12. Nucleic Acids Res. 2007. PMID: 17567614 Free PMC article.

2

COXPRESdb: a database of coexpressed gene networks in mammals.

Obayashi T, Hayashi S, Shibaoka M, Saeki M, Ohta H, Kinoshita K. Obayashi T, et al. Among authors: kinoshita k. Nucleic Acids Res. 2008 Jan;36(Database issue):D77-82. doi: 10.1093/nar/gkm840. Epub 2007 Oct 11. Nucleic Acids Res. 2008. PMID: 17932064 Free PMC article.

3

DBTGR: a database of tunicate promoters and their regulatory elements.

Sierro N, Kusakabe T, Park KJ, Yamashita R, Kinoshita K, Nakai K. Sierro N, et al. Among authors: kinoshita k. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D552-5. doi: 10.1093/nar/gkj064. Nucleic Acids Res. 2006. PMID: 16381930 Free PMC article.

4

PreBI: prediction of biological interfaces of proteins in crystals.

Tsuchiya Y, Kinoshita K, Ito N, Nakamura H. Tsuchiya Y, et al. Among authors: kinoshita k. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W320-4. doi: 10.1093/nar/gkl267. Nucleic Acids Res. 2006. PMID: 16844993 Free PMC article.

5

NLDB: a database for 3D protein-ligand interactions in enzymatic reactions.

Murakami Y, Omori S, Kinoshita K. Murakami Y, et al. Among authors: kinoshita k. J Struct Funct Genomics. 2016 Dec;17(4):101-110. doi: 10.1007/s10969-016-9206-0. Epub 2016 Aug 16. J Struct Funct Genomics. 2016. PMID: 27530928 Free PMC article.

6

SAHG, a comprehensive database of predicted structures of all human proteins.

Motono C, Nakata J, Koike R, Shimizu K, Shirota M, Amemiya T, Tomii K, Nagano N, Sakaya N, Misoo K, Sato M, Kidera A, Hiroaki H, Shirai T, Kinoshita K, Noguchi T, Ota M. Motono C, et al. Among authors: kinoshita k. Nucleic Acids Res. 2011 Jan;39(Database issue):D487-93. doi: 10.1093/nar/gkq1057. Epub 2010 Nov 3. Nucleic Acids Res. 2011. PMID: 21051360 Free PMC article.

7

PiSite: a database of protein interaction sites using multiple binding states in the PDB.

Higurashi M, Ishida T, Kinoshita K. Higurashi M, et al. Among authors: kinoshita k. Nucleic Acids Res. 2009 Jan;37(Database issue):D360-4. doi: 10.1093/nar/gkn659. Epub 2008 Oct 4. Nucleic Acids Res. 2009. PMID: 18836195 Free PMC article.

8

eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape.

Kinoshita K, Murakami Y, Nakamura H. Kinoshita K, et al. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W398-402. doi: 10.1093/nar/gkm351. Epub 2007 Jun 12. Nucleic Acids Res. 2007. PMID: 17567616 Free PMC article.

9

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.

Obayashi T, Kinoshita K, Nakai K, Shibaoka M, Hayashi S, Saeki M, Shibata D, Saito K, Ohta H. Obayashi T, et al. Among authors: kinoshita k. Nucleic Acids Res. 2007 Jan;35(Database issue):D863-9. doi: 10.1093/nar/gkl783. Epub 2006 Nov 27. Nucleic Acids Res. 2007. PMID: 17130150 Free PMC article.

10

Identification of the ligand binding sites on the molecular surface of proteins.

Kinoshita K, Nakamura H. Kinoshita K, et al. Protein Sci. 2005 Mar;14(3):711-8. doi: 10.1110/ps.041080105. Epub 2005 Feb 2. Protein Sci. 2005. PMID: 15689509 Free PMC article.

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