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Informatics methods to enable sharing of quantitative imaging research data.
Levy MA, Freymann JB, Kirby JS, Fedorov A, Fennessy FM, Eschrich SA, Berglund AE, Fenstermacher DA, Tan Y, Guo X, Casavant TL, Brown BJ, Braun TA, Dekker A, Roelofs E, Mountz JM, Boada F, Laymon C, Oborski M, Rubin DL. Levy MA, et al. Among authors: kirby js. Magn Reson Imaging. 2012 Nov;30(9):1249-56. doi: 10.1016/j.mri.2012.04.007. Epub 2012 Jul 6. Magn Reson Imaging. 2012. PMID: 22770688 Free PMC article.
MR imaging predictors of molecular profile and survival: multi-institutional study of the TCGA glioblastoma data set.
Gutman DA, Cooper LA, Hwang SN, Holder CA, Gao J, Aurora TD, Dunn WD Jr, Scarpace L, Mikkelsen T, Jain R, Wintermark M, Jilwan M, Raghavan P, Huang E, Clifford RJ, Mongkolwat P, Kleper V, Freymann J, Kirby J, Zinn PO, Moreno CS, Jaffe C, Colen R, Rubin DL, Saltz J, Flanders A, Brat DJ. Gutman DA, et al. Radiology. 2013 May;267(2):560-9. doi: 10.1148/radiol.13120118. Epub 2013 Feb 7. Radiology. 2013. PMID: 23392431 Free PMC article.
TCIA: An information resource to enable open science.
Prior FW, Clark K, Commean P, Freymann J, Jaffe C, Kirby J, Moore S, Smith K, Tarbox L, Vendt B, Marquez G. Prior FW, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2013;2013:1282-5. doi: 10.1109/EMBC.2013.6609742. Annu Int Conf IEEE Eng Med Biol Soc. 2013. PMID: 24109929 Free PMC article.
Addition of MR imaging features and genetic biomarkers strengthens glioblastoma survival prediction in TCGA patients.
Nicolasjilwan M, Hu Y, Yan C, Meerzaman D, Holder CA, Gutman D, Jain R, Colen R, Rubin DL, Zinn PO, Hwang SN, Raghavan P, Hammoud DA, Scarpace LM, Mikkelsen T, Chen J, Gevaert O, Buetow K, Freymann J, Kirby J, Flanders AE, Wintermark M; TCGA Glioma Phenotype Research Group. Nicolasjilwan M, et al. J Neuroradiol. 2015 Jul;42(4):212-21. doi: 10.1016/j.neurad.2014.02.006. Epub 2014 Jul 2. J Neuroradiol. 2015. PMID: 24997477 Free PMC article.
Radiogenomics of clear cell renal cell carcinoma: preliminary findings of The Cancer Genome Atlas-Renal Cell Carcinoma (TCGA-RCC) Imaging Research Group.
Shinagare AB, Vikram R, Jaffe C, Akin O, Kirby J, Huang E, Freymann J, Sainani NI, Sadow CA, Bathala TK, Rubin DL, Oto A, Heller MT, Surabhi VR, Katabathina V, Silverman SG. Shinagare AB, et al. Abdom Imaging. 2015 Aug;40(6):1684-92. doi: 10.1007/s00261-015-0386-z. Abdom Imaging. 2015. PMID: 25753955 Free PMC article.
Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival.
Wangaryattawanich P, Hatami M, Wang J, Thomas G, Flanders A, Kirby J, Wintermark M, Huang ES, Bakhtiari AS, Luedi MM, Hashmi SS, Rubin DL, Chen JY, Hwang SN, Freymann J, Holder CA, Zinn PO, Colen RR. Wangaryattawanich P, et al. Neuro Oncol. 2015 Nov;17(11):1525-37. doi: 10.1093/neuonc/nov117. Epub 2015 Jul 22. Neuro Oncol. 2015. PMID: 26203066 Free PMC article.
168 results