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47 results
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RNA editing of protein sequences: a rare event in human transcriptomes.
Kleinman CL, Adoue V, Majewski J. Kleinman CL, et al. RNA. 2012 Sep;18(9):1586-96. doi: 10.1261/rna.033233.112. Epub 2012 Jul 25. RNA. 2012. PMID: 22832026 Free PMC article.
Statistical potentials for improved structurally constrained evolutionary models.
Kleinman CL, Rodrigue N, Lartillot N, Philippe H. Kleinman CL, et al. Mol Biol Evol. 2010 Jul;27(7):1546-60. doi: 10.1093/molbev/msq047. Epub 2010 Feb 16. Mol Biol Evol. 2010. PMID: 20159780
RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression.
Lalonde E, Ha KC, Wang Z, Bemmo A, Kleinman CL, Kwan T, Pastinen T, Majewski J. Lalonde E, et al. Among authors: kleinman cl. Genome Res. 2011 Apr;21(4):545-54. doi: 10.1101/gr.111211.110. Epub 2010 Dec 20. Genome Res. 2011. PMID: 21173033 Free PMC article.
Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".
Kleinman CL, Majewski J. Kleinman CL, et al. Science. 2012 Mar 16;335(6074):1302; author reply 1302. doi: 10.1126/science.1209658. Science. 2012. PMID: 22422962
A maximum likelihood framework for protein design.
Kleinman CL, Rodrigue N, Bonnard C, Philippe H, Lartillot N. Kleinman CL, et al. BMC Bioinformatics. 2006 Jun 29;7:326. doi: 10.1186/1471-2105-7-326. BMC Bioinformatics. 2006. PMID: 16808841 Free PMC article.
HIV-1 infection causes a down-regulation of genes involved in ribosome biogenesis.
Kleinman CL, Doria M, Orecchini E, Giuliani E, Galardi S, De Jay N, Michienzi A. Kleinman CL, et al. PLoS One. 2014 Dec 2;9(12):e113908. doi: 10.1371/journal.pone.0113908. eCollection 2014. PLoS One. 2014. PMID: 25462981 Free PMC article.
Macrocyclic lactone resistance in Dirofilaria immitis: Failure of heartworm preventives and investigation of genetic markers for resistance.
Bourguinat C, Lee AC, Lizundia R, Blagburn BL, Liotta JL, Kraus MS, Keller K, Epe C, Letourneau L, Kleinman CL, Paterson T, Gomez EC, Montoya-Alonso JA, Smith H, Bhan A, Peregrine AS, Carmichael J, Drake J, Schenker R, Kaminsky R, Bowman DD, Geary TG, Prichard RK. Bourguinat C, et al. Among authors: kleinman cl. Vet Parasitol. 2015 Jun 15;210(3-4):167-78. doi: 10.1016/j.vetpar.2015.04.002. Epub 2015 Apr 13. Vet Parasitol. 2015. PMID: 25936435
Gene networks show associations with seed region connectivity.
Forest M, Iturria-Medina Y, Goldman JS, Kleinman CL, Lovato A, Oros Klein K, Evans A, Ciampi A, Labbe A, Greenwood CMT. Forest M, et al. Among authors: kleinman cl. Hum Brain Mapp. 2017 Jun;38(6):3126-3140. doi: 10.1002/hbm.23579. Epub 2017 Mar 21. Hum Brain Mapp. 2017. PMID: 28321948 Free PMC article.
ChIP-seq analysis of the LuxR-type regulator VjbR reveals novel insights into the Brucella virulence gene expression network.
Kleinman CL, Sycz G, Bonomi HR, Rodríguez RM, Zorreguieta A, Sieira R. Kleinman CL, et al. Nucleic Acids Res. 2017 Jun 2;45(10):5757-5769. doi: 10.1093/nar/gkx165. Nucleic Acids Res. 2017. PMID: 28334833 Free PMC article.
Characterizing temporal genomic heterogeneity in pediatric high-grade gliomas.
Salloum R, McConechy MK, Mikael LG, Fuller C, Drissi R, DeWire M, Nikbakht H, De Jay N, Yang X, Boue D, Chow LML, Finlay JL, Gayden T, Karamchandani J, Hummel TR, Olshefski R, Osorio DS, Stevenson C, Kleinman CL, Majewski J, Fouladi M, Jabado N. Salloum R, et al. Among authors: kleinman cl. Acta Neuropathol Commun. 2017 Oct 30;5(1):78. doi: 10.1186/s40478-017-0479-8. Acta Neuropathol Commun. 2017. PMID: 29084603 Free PMC article.
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