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The impact of the gut microbiota on human health: an integrative view.
Clemente JC, Ursell LK, Parfrey LW, Knight R. Clemente JC, et al. Among authors: Knight R. Cell. 2012 Mar 16;148(6):1258-70. doi: 10.1016/j.cell.2012.01.035. Cell. 2012. PMID: 22424233 Free PMC article. Review.
UniFrac: a new phylogenetic method for comparing microbial communities.
Lozupone C, Knight R. Lozupone C, et al. Among authors: Knight R. Appl Environ Microbiol. 2005 Dec;71(12):8228-35. doi: 10.1128/AEM.71.12.8228-8235.2005. Appl Environ Microbiol. 2005. PMID: 16332807 Free PMC article.
Global patterns in bacterial diversity.
Lozupone CA, Knight R. Lozupone CA, et al. Among authors: Knight R. Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11436-40. doi: 10.1073/pnas.0611525104. Epub 2007 Jun 25. Proc Natl Acad Sci U S A. 2007. PMID: 17592124 Free PMC article.
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.
Fierer N, Breitbart M, Nulton J, Salamon P, Lozupone C, Jones R, Robeson M, Edwards RA, Felts B, Rayhawk S, Knight R, Rohwer F, Jackson RB. Fierer N, et al. Among authors: Knight R. Appl Environ Microbiol. 2007 Nov;73(21):7059-66. doi: 10.1128/AEM.00358-07. Epub 2007 Sep 7. Appl Environ Microbiol. 2007. PMID: 17827313 Free PMC article.
Short pyrosequencing reads suffice for accurate microbial community analysis.
Liu Z, Lozupone C, Hamady M, Bushman FD, Knight R. Liu Z, et al. Among authors: Knight R. Nucleic Acids Res. 2007;35(18):e120. doi: 10.1093/nar/gkm541. Epub 2007 Sep 18. Nucleic Acids Res. 2007. PMID: 17881377 Free PMC article.
Short-term temporal variability in airborne bacterial and fungal populations.
Fierer N, Liu Z, Rodríguez-Hernández M, Knight R, Henn M, Hernandez MT. Fierer N, et al. Among authors: Knight R. Appl Environ Microbiol. 2008 Jan;74(1):200-7. doi: 10.1128/AEM.01467-07. Epub 2007 Nov 2. Appl Environ Microbiol. 2008. PMID: 17981945 Free PMC article.
The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis.
McKenna P, Hoffmann C, Minkah N, Aye PP, Lackner A, Liu Z, Lozupone CA, Hamady M, Knight R, Bushman FD. McKenna P, et al. Among authors: Knight R. Version 2. PLoS Pathog. 2008 Feb 8;4(2):e20. doi: 10.1371/journal.ppat.0040020. PLoS Pathog. 2008. PMID: 18248093 Free PMC article.
Host-bacterial coevolution and the search for new drug targets.
Zaneveld J, Turnbaugh PJ, Lozupone C, Ley RE, Hamady M, Gordon JI, Knight R. Zaneveld J, et al. Among authors: Knight R. Curr Opin Chem Biol. 2008 Feb;12(1):109-14. doi: 10.1016/j.cbpa.2008.01.015. Epub 2008 Mar 5. Curr Opin Chem Biol. 2008. PMID: 18280814 Free PMC article. Review.
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