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Genomic standards consortium projects.
Field D, Sterk P, Kottmann R, De Smet JW, Amaral-Zettler L, Cochrane G, Cole JR, Davies N, Dawyndt P, Garrity GM, Gilbert JA, Glöckner FO, Hirschman L, Klenk HP, Knight R, Kyrpides N, Meyer F, Karsch-Mizrachi I, Morrison N, Robbins R, San Gil I, Sansone S, Schriml L, Tatusova T, Ussery D, Yilmaz P, White O, Wooley J, Caporaso G. Field D, et al. Among authors: knight r. Stand Genomic Sci. 2014 Feb 15;9(3):599-601. doi: 10.4056/sigs.5559680. eCollection 2014 Jun 15. Stand Genomic Sci. 2014. PMID: 25197446 Free PMC article.
Supervised classification of microbiota mitigates mislabeling errors.
Knights D, Kuczynski J, Koren O, Ley RE, Field D, Knight R, DeSantis TZ, Kelley ST. Knights D, et al. Among authors: knight r. ISME J. 2011 Apr;5(4):570-3. doi: 10.1038/ismej.2010.148. Epub 2010 Oct 7. ISME J. 2011. PMID: 20927137 Free PMC article. No abstract available.
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.
Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, Sterk P, Arumugam M, Bailey M, Baumgartner L, Birren BW, Blaser MJ, Bonazzi V, Booth T, Bork P, Bushman FD, Buttigieg PL, Chain PS, Charlson E, Costello EK, Huot-Creasy H, Dawyndt P, DeSantis T, Fierer N, Fuhrman JA, Gallery RE, Gevers D, Gibbs RA, San Gil I, Gonzalez A, Gordon JI, Guralnick R, Hankeln W, Highlander S, Hugenholtz P, Jansson J, Kau AL, Kelley ST, Kennedy J, Knights D, Koren O, Kuczynski J, Kyrpides N, Larsen R, Lauber CL, Legg T, Ley RE, Lozupone CA, Ludwig W, Lyons D, Maguire E, Methé BA, Meyer F, Muegge B, Nakielny S, Nelson KE, Nemergut D, Neufeld JD, Newbold LK, Oliver AE, Pace NR, Palanisamy G, Peplies J, Petrosino J, Proctor L, Pruesse E, Quast C, Raes J, Ratnasingham S, Ravel J, Relman DA, Assunta-Sansone S, Schloss PD, Schriml L, Sinha R, Smith MI, Sodergren E, Spo A, Stombaugh J, Tiedje JM, Ward DV, Weinstock GM, Wendel D, White O, Whiteley A, Wilke A, Wortman JR, Yatsunenko T, Glöckner FO. Yilmaz P, et al. Among authors: knight r. Nat Biotechnol. 2011 May;29(5):415-20. doi: 10.1038/nbt.1823. Nat Biotechnol. 2011. PMID: 21552244 Free PMC article.
Meeting report of the RNA Ontology Consortium January 8-9, 2011.
Birmingham A, Clemente JC, Desai N, Gilbert J, Gonzalez A, Kyrpides N, Meyer F, Nawrocki E, Sterk P, Stombaugh J, Weinberg Z, Wendel D, Leontis NB, Zirbel C, Knight R, Laederach A. Birmingham A, et al. Among authors: knight r. Stand Genomic Sci. 2011 Apr 29;4(2):252-6. doi: 10.4056/sigs.1724282. Stand Genomic Sci. 2011. PMID: 21677862 Free PMC article.
The Genomic Standards Consortium.
Field D, Amaral-Zettler L, Cochrane G, Cole JR, Dawyndt P, Garrity GM, Gilbert J, Glöckner FO, Hirschman L, Karsch-Mizrachi I, Klenk HP, Knight R, Kottmann R, Kyrpides N, Meyer F, San Gil I, Sansone SA, Schriml LM, Sterk P, Tatusova T, Ussery DW, White O, Wooley J. Field D, et al. Among authors: knight r. PLoS Biol. 2011 Jun;9(6):e1001088. doi: 10.1371/journal.pbio.1001088. Epub 2011 Jun 21. PLoS Biol. 2011. PMID: 21713030 Free PMC article.
Conceptualizing a Genomics Software Institute (GSI).
Gilbert JA, Catlett C, Desai N, Knight R, White O, Robbins R, Sankaran R, Sansone SA, Field D, Meyer F. Gilbert JA, et al. Among authors: knight r. Stand Genomic Sci. 2012 Mar 19;6(1):136-44. doi: 10.4056/sigs.2485911. Epub 2012 Mar 5. Stand Genomic Sci. 2012. PMID: 22675605 Free PMC article.
Unlocking the potential of metagenomics through replicated experimental design.
Knight R, Jansson J, Field D, Fierer N, Desai N, Fuhrman JA, Hugenholtz P, van der Lelie D, Meyer F, Stevens R, Bailey MJ, Gordon JI, Kowalchuk GA, Gilbert JA. Knight R, et al. Nat Biotechnol. 2012 Jun 7;30(6):513-20. doi: 10.1038/nbt.2235. Nat Biotechnol. 2012. PMID: 22678395 Free PMC article.
Evidence for a persistent microbial seed bank throughout the global ocean.
Gibbons SM, Caporaso JG, Pirrung M, Field D, Knight R, Gilbert JA. Gibbons SM, et al. Among authors: knight r. Proc Natl Acad Sci U S A. 2013 Mar 19;110(12):4651-5. doi: 10.1073/pnas.1217767110. Epub 2013 Mar 4. Proc Natl Acad Sci U S A. 2013. PMID: 23487761 Free PMC article.
3,319 results