Knudsen S - Search Results

1

Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays.

Nielsen HB, Wernersson R, Knudsen S. Nielsen HB, et al. Among authors: knudsen s. Nucleic Acids Res. 2003 Jul 1;31(13):3491-6. doi: 10.1093/nar/gkg622. Nucleic Acids Res. 2003. PMID: 12824351 Free PMC article.

2

Implementation of a gene expression index calculation method based on the PDNN model.

Nielsen HB, Gautier L, Knudsen S. Nielsen HB, et al. Among authors: knudsen s. Bioinformatics. 2005 Mar 1;21(5):687-8. doi: 10.1093/bioinformatics/bti078. Epub 2004 Oct 27. Bioinformatics. 2005. PMID: 15509605

3

Avoiding cross hybridization by choosing nonredundant targets on cDNA arrays.

Nielsen HB, Knudsen S. Nielsen HB, et al. Among authors: knudsen s. Bioinformatics. 2002 Feb;18(2):321-2. doi: 10.1093/bioinformatics/18.2.321. Bioinformatics. 2002. PMID: 11847081

4

New weakly expressed cell cycle-regulated genes in yeast.

de Lichtenberg U, Wernersson R, Jensen TS, Nielsen HB, Fausbøll A, Schmidt P, Hansen FB, Knudsen S, Brunak S. de Lichtenberg U, et al. Among authors: knudsen s. Yeast. 2005 Nov;22(15):1191-201. doi: 10.1002/yea.1302. Yeast. 2005. PMID: 16278933

5

GenePublisher: Automated analysis of DNA microarray data.

Knudsen S, Workman C, Sicheritz-Ponten T, Friis C. Knudsen S, et al. Nucleic Acids Res. 2003 Jul 1;31(13):3471-6. doi: 10.1093/nar/gkg629. Nucleic Acids Res. 2003. PMID: 12824347 Free PMC article.

6

Prediction of human protein function from post-translational modifications and localization features.

Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Staerfeldt HH, Rapacki K, Workman C, Andersen CA, Knudsen S, Krogh A, Valencia A, Brunak S. Jensen LJ, et al. Among authors: knudsen s. J Mol Biol. 2002 Jun 21;319(5):1257-65. doi: 10.1016/S0022-2836(02)00379-0. J Mol Biol. 2002. PMID: 12079362

7

Transcriptome analysis documents induced competence of Bacillus subtilis during nitrogen limiting conditions.

Jarmer H, Berka R, Knudsen S, Saxild HH. Jarmer H, et al. Among authors: knudsen s. FEMS Microbiol Lett. 2002 Jan 10;206(2):197-200. doi: 10.1111/j.1574-6968.2002.tb11009.x. FEMS Microbiol Lett. 2002. PMID: 11814663

8

Neural network predicts sequence of TP53 gene based on DNA chip.

Spicker JS, Wikman F, Lu ML, Cordon-Cardo C, Workman C, ØRntoft TF, Brunak S, Knudsen S. Spicker JS, et al. Among authors: knudsen s. Bioinformatics. 2002 Aug;18(8):1133-4. doi: 10.1093/bioinformatics/18.8.1133. Bioinformatics. 2002. PMID: 12176837

9

Alternative mapping of probes to genes for Affymetrix chips.

Gautier L, Møller M, Friis-Hansen L, Knudsen S. Gautier L, et al. Among authors: knudsen s. BMC Bioinformatics. 2004 Aug 14;5:111. doi: 10.1186/1471-2105-5-111. BMC Bioinformatics. 2004. PMID: 15310390 Free PMC article.

10

Neural network detects errors in the assignment of mRNA splice sites.

Brunak S, Engelbrecht J, Knudsen S. Brunak S, et al. Among authors: knudsen s. Nucleic Acids Res. 1990 Aug 25;18(16):4797-801. doi: 10.1093/nar/18.16.4797. Nucleic Acids Res. 1990. PMID: 2395643 Free PMC article.

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