Koehl P - Search Results

1

PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostatics.

Azuara C, Lindahl E, Koehl P, Orland H, Delarue M. Azuara C, et al. Among authors: koehl p. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W38-42. doi: 10.1093/nar/gkl072. Nucleic Acids Res. 2006. PMID: 16845031 Free PMC article.

2

Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.

Hu H, Ataka K, Menny A, Fourati Z, Sauguet L, Corringer PJ, Koehl P, Heberle J, Delarue M. Hu H, et al. Among authors: koehl p. Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):E12172-E12181. doi: 10.1073/pnas.1813378116. Epub 2018 Dec 12. Proc Natl Acad Sci U S A. 2018. PMID: 30541892 Free PMC article.

3

Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.

Sauguet L, Poitevin F, Murail S, Van Renterghem C, Moraga-Cid G, Malherbe L, Thompson AW, Koehl P, Corringer PJ, Baaden M, Delarue M. Sauguet L, et al. Among authors: koehl p. EMBO J. 2013 Mar 6;32(5):728-41. doi: 10.1038/emboj.2013.17. Epub 2013 Feb 12. EMBO J. 2013. PMID: 23403925 Free PMC article.

4

Adapting Poisson-Boltzmann to the self-consistent mean field theory: application to protein side-chain modeling.

Koehl P, Orland H, Delarue M. Koehl P, et al. J Chem Phys. 2011 Aug 7;135(5):055104. doi: 10.1063/1.3621831. J Chem Phys. 2011. PMID: 21823735 Free PMC article.

5

AQUASOL: An efficient solver for the dipolar Poisson-Boltzmann-Langevin equation.

Koehl P, Delarue M. Koehl P, et al. J Chem Phys. 2010 Feb 14;132(6):064101. doi: 10.1063/1.3298862. J Chem Phys. 2010. PMID: 20151727 Free PMC article.

6

Beyond the Poisson-Boltzmann model: modeling biomolecule-water and water-water interactions.

Koehl P, Orland H, Delarue M. Koehl P, et al. Phys Rev Lett. 2009 Feb 27;102(8):087801. doi: 10.1103/PhysRevLett.102.087801. Epub 2009 Feb 24. Phys Rev Lett. 2009. PMID: 19257790 Free PMC article.

7

Incorporating dipolar solvents with variable density in Poisson-Boltzmann electrostatics.

Azuara C, Orland H, Bon M, Koehl P, Delarue M. Azuara C, et al. Among authors: koehl p. Biophys J. 2008 Dec 15;95(12):5587-605. doi: 10.1529/biophysj.108.131649. Epub 2008 Sep 26. Biophys J. 2008. PMID: 18820239 Free PMC article.

8

Electrostatics calculations: latest methodological advances.

Koehl P. Koehl P. Curr Opin Struct Biol. 2006 Apr;16(2):142-51. doi: 10.1016/j.sbi.2006.03.001. Epub 2006 Mar 15. Curr Opin Struct Biol. 2006. PMID: 16540310 Review.

9

AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models.

Poitevin F, Orland H, Doniach S, Koehl P, Delarue M. Poitevin F, et al. Among authors: koehl p. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W184-9. doi: 10.1093/nar/gkr430. Epub 2011 Jun 10. Nucleic Acids Res. 2011. PMID: 21665925 Free PMC article.

10

NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis.

Lindahl E, Azuara C, Koehl P, Delarue M. Lindahl E, et al. Among authors: koehl p. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W52-6. doi: 10.1093/nar/gkl082. Nucleic Acids Res. 2006. PMID: 16845062 Free PMC article.

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