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Glycomics, glycoproteomics and the immune system.
Kolarich D, Lepenies B, Seeberger PH. Kolarich D, et al. Curr Opin Chem Biol. 2012 Apr;16(1-2):214-20. doi: 10.1016/j.cbpa.2011.12.006. Epub 2012 Jan 3. Curr Opin Chem Biol. 2012. PMID: 22221852 Review.
Mucin-type O-glycosylation--putting the pieces together.
Jensen PH, Kolarich D, Packer NH. Jensen PH, et al. FEBS J. 2010 Jan;277(1):81-94. doi: 10.1111/j.1742-4658.2009.07429.x. Epub 2009 Nov 17. FEBS J. 2010. PMID: 19919547 Review.
Comparison of methods for profiling O-glycosylation: Human Proteome Organisation Human Disease Glycomics/Proteome Initiative multi-institutional study of IgA1.
Wada Y, Dell A, Haslam SM, Tissot B, Canis K, Azadi P, Bäckström M, Costello CE, Hansson GC, Hiki Y, Ishihara M, Ito H, Kakehi K, Karlsson N, Hayes CE, Kato K, Kawasaki N, Khoo KH, Kobayashi K, Kolarich D, Kondo A, Lebrilla C, Nakano M, Narimatsu H, Novak J, Novotny MV, Ohno E, Packer NH, Palaima E, Renfrow MB, Tajiri M, Thomsson KA, Yagi H, Yu SY, Taniguchi N. Wada Y, et al. Mol Cell Proteomics. 2010 Apr;9(4):719-27. doi: 10.1074/mcp.M900450-MCP200. Epub 2009 Dec 28. Mol Cell Proteomics. 2010. PMID: 20038609 Free PMC article. Clinical Trial.
Liver membrane proteome glycosylation changes in mice bearing an extra-hepatic tumor.
Lee A, Chick JM, Kolarich D, Haynes PA, Robertson GR, Tsoli M, Jankova L, Clarke SJ, Packer NH, Baker MS. Lee A, et al. Mol Cell Proteomics. 2011 Sep;10(9):M900538MCP200. doi: 10.1074/mcp.M900538-MCP200. Epub 2010 Feb 18. Mol Cell Proteomics. 2011. PMID: 20167946 Free PMC article.
., Mangnall, D., and Majeed, A. W. (2006) Biology of colorectal liver metastases: A review. J. Surg. Oncol. 94, 68-80; Dimitroff, C. ...
., Mangnall, D., and Majeed, A. W. (2006) Biology of colorectal liver metastases: A review. J. Surg. Oncol. 94, 68-80; Dimitroff, C. …
N-glycans modulate the function of human corticosteroid-binding globulin.
Sumer-Bayraktar Z, Kolarich D, Campbell MP, Ali S, Packer NH, Thaysen-Andersen M. Sumer-Bayraktar Z, et al. Mol Cell Proteomics. 2011 Aug;10(8):M111.009100. doi: 10.1074/mcp.M111.009100. Epub 2011 May 10. Mol Cell Proteomics. 2011. PMID: 21558494 Free PMC article.
UniCarbKB: putting the pieces together for glycomics research.
Campbell MP, Hayes CA, Struwe WB, Wilkins MR, Aoki-Kinoshita KF, Harvey DJ, Rudd PM, Kolarich D, Lisacek F, Karlsson NG, Packer NH. Campbell MP, et al. Proteomics. 2011 Nov;11(21):4117-21. doi: 10.1002/pmic.201100302. Epub 2011 Sep 19. Proteomics. 2011. PMID: 21898825
Determination of site-specific glycan heterogeneity on glycoproteins.
Kolarich D, Jensen PH, Altmann F, Packer NH. Kolarich D, et al. Nat Protoc. 2012 Jun 7;7(7):1285-98. doi: 10.1038/nprot.2012.062. Nat Protoc. 2012. PMID: 22678432
The described workflow takes approximately 3-5 d, including sample preparation and data analysis. The data obtained from analyzing released glycans of rHuEPO and IgG, described in the second protocol of this series (10.1038/nprot.2012.063), provide complementary detailed g …
The described workflow takes approximately 3-5 d, including sample preparation and data analysis. The data obtained from analyzing re …
Comparative structural analysis of the glycosylation of salivary and buccal cell proteins: innate protection against infection by Candida albicans.
Everest-Dass AV, Jin D, Thaysen-Andersen M, Nevalainen H, Kolarich D, Packer NH. Everest-Dass AV, et al. Glycobiology. 2012 Nov;22(11):1465-79. doi: 10.1093/glycob/cws112. Epub 2012 Jul 24. Glycobiology. 2012. PMID: 22833316
Characterization of N- and O-linked glycosylation changes in milk of the tammar wallaby (Macropus eugenii) over lactation.
Wongtrakul-Kish K, Kolarich D, Pascovici D, Joss JL, Deane E, Packer NH. Wongtrakul-Kish K, et al. Glycoconj J. 2013 Jul;30(5):523-36. doi: 10.1007/s10719-012-9452-8. Epub 2012 Oct 10. Glycoconj J. 2013. PMID: 23053637
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