Krásný L - Search Results

1

The mechanism of RNA 5′ capping with NAD+, NADH and desphospho-CoA.

Bird JG, Zhang Y, Tian Y, Panova N, Barvík I, Greene L, Liu M, Buckley B, Krásný L, Lee JK, Kaplan CD, Ebright RH, Nickels BE. Bird JG, et al. Among authors: krasny l. Nature. 2016 Jul 21;535(7612):444-7. doi: 10.1038/nature18622. Epub 2016 Jul 6. Nature. 2016. PMID: 27383794 Free PMC article.

2

CapZyme-Seq Comprehensively Defines Promoter-Sequence Determinants for RNA 5' Capping with NAD<sup/>

Vvedenskaya IO, Bird JG, Zhang Y, Zhang Y, Jiao X, Barvík I, Krásný L, Kiledjian M, Taylor DM, Ebright RH, Nickels BE. Vvedenskaya IO, et al. Among authors: krasny l. Mol Cell. 2018 May 3;70(3):553-564.e9. doi: 10.1016/j.molcel.2018.03.014. Epub 2018 Apr 19. Mol Cell. 2018. PMID: 29681497 Free PMC article.

3

Non-canonical transcription initiation: the expanding universe of transcription initiating substrates.

Barvík I, Rejman D, Panova N, Šanderová H, Krásný L. Barvík I, et al. Among authors: krasny l. FEMS Microbiol Rev. 2017 Mar 1;41(2):131-138. doi: 10.1093/femsre/fuw041. FEMS Microbiol Rev. 2017. PMID: 27799279 Review.

4

Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase.

Kouba T, Koval' T, Sudzinová P, Pospíšil J, Brezovská B, Hnilicová J, Šanderová H, Janoušková M, Šiková M, Halada P, Sýkora M, Barvík I, Nováček J, Trundová M, Dušková J, Skálová T, Chon U, Murakami KS, Dohnálek J, Krásný L. Kouba T, et al. Among authors: krasny l. Nat Commun. 2020 Dec 18;11(1):6419. doi: 10.1038/s41467-020-20158-4. Nat Commun. 2020. PMID: 33339823 Free PMC article.

5

Rapid changes in gene expression: DNA determinants of promoter regulation by the concentration of the transcription initiating NTP in Bacillus subtilis.

Sojka L, Kouba T, Barvík I, Sanderová H, Maderová Z, Jonák J, Krásny L. Sojka L, et al. Among authors: krasny l. Nucleic Acids Res. 2011 Jun;39(11):4598-611. doi: 10.1093/nar/gkr032. Epub 2011 Feb 7. Nucleic Acids Res. 2011. PMID: 21303765 Free PMC article.

6

The δ subunit of RNA polymerase is required for rapid changes in gene expression and competitive fitness of the cell.

Rabatinová A, Šanderová H, Jirát Matějčková J, Korelusová J, Sojka L, Barvík I, Papoušková V, Sklenár V, Žídek L, Krásný L. Rabatinová A, et al. Among authors: krasny l. J Bacteriol. 2013 Jun;195(11):2603-11. doi: 10.1128/JB.00188-13. Epub 2013 Mar 29. J Bacteriol. 2013. PMID: 23543716 Free PMC article.

7

Solution structure of domain 1.1 of the σ^A factor from Bacillus subtilis is preformed for binding to the RNA polymerase core.

Zachrdla M, Padrta P, Rabatinová A, Šanderová H, Barvík I, Krásný L, Žídek L. Zachrdla M, et al. Among authors: krasny l. J Biol Chem. 2017 Jul 14;292(28):11610-11617. doi: 10.1074/jbc.M117.784074. Epub 2017 May 24. J Biol Chem. 2017. PMID: 28539362 Free PMC article.

8

The Core and Holoenzyme Forms of RNA Polymerase from Mycobacterium smegmatis.

Kouba T, Pospíšil J, Hnilicová J, Šanderová H, Barvík I, Krásný L. Kouba T, et al. Among authors: krasny l. J Bacteriol. 2019 Jan 28;201(4):e00583-18. doi: 10.1128/JB.00583-18. Print 2019 Feb 15. J Bacteriol. 2019. PMID: 30478083 Free PMC article.

9

The torpedo effect in Bacillus subtilis: RNase J1 resolves stalled transcription complexes.

Šiková M, Wiedermannová J, Převorovský M, Barvík I, Sudzinová P, Kofroňová O, Benada O, Šanderová H, Condon C, Krásný L. Šiková M, et al. Among authors: krasny l. EMBO J. 2020 Feb 3;39(3):e102500. doi: 10.15252/embj.2019102500. Epub 2019 Dec 16. EMBO J. 2020. PMID: 31840842 Free PMC article.

10

Influence of major-groove chemical modifications of DNA on transcription by bacterial RNA polymerases.

Raindlová V, Janoušková M, Slavíčková M, Perlíková P, Boháčová S, Milisavljevič N, Šanderová H, Benda M, Barvík I, Krásný L, Hocek M. Raindlová V, et al. Among authors: krasny l. Nucleic Acids Res. 2016 Apr 20;44(7):3000-12. doi: 10.1093/nar/gkw171. Epub 2016 Mar 21. Nucleic Acids Res. 2016. PMID: 27001521 Free PMC article.

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