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Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase.
Garcia-Diaz M, Bebenek K, Krahn JM, Pedersen LC, Kunkel TA. Garcia-Diaz M, et al. Among authors: krahn jm. Cell. 2006 Jan 27;124(2):331-42. doi: 10.1016/j.cell.2005.10.039. Cell. 2006. PMID: 16439207
A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs.
Zhu D, Stumpf CR, Krahn JM, Wickens M, Hall TM. Zhu D, et al. Among authors: krahn jm. Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20192-7. doi: 10.1073/pnas.0812079106. Epub 2009 Nov 16. Proc Natl Acad Sci U S A. 2009. PMID: 19918084 Free PMC article.
Der p 5 crystal structure provides insight into the group 5 dust mite allergens.
Mueller GA, Gosavi RA, Krahn JM, Edwards LL, Cuneo MJ, Glesner J, Pomés A, Chapman MD, London RE, Pedersen LC. Mueller GA, et al. Among authors: krahn jm. J Biol Chem. 2010 Aug 13;285(33):25394-401. doi: 10.1074/jbc.M110.128306. Epub 2010 Jun 9. J Biol Chem. 2010. PMID: 20534590 Free PMC article.
Dissecting the substrate recognition of 3-O-sulfotransferase for the biosynthesis of anticoagulant heparin.
Moon AF, Xu Y, Woody SM, Krahn JM, Linhardt RJ, Liu J, Pedersen LC. Moon AF, et al. Among authors: krahn jm. Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5265-70. doi: 10.1073/pnas.1117923109. Epub 2012 Mar 19. Proc Natl Acad Sci U S A. 2012. PMID: 22431632 Free PMC article.
The structural basis for partitioning of the XRCC1/DNA ligase III-α BRCT-mediated dimer complexes.
Cuneo MJ, Gabel SA, Krahn JM, Ricker MA, London RE. Cuneo MJ, et al. Among authors: krahn jm. Nucleic Acids Res. 2011 Sep 1;39(17):7816-27. doi: 10.1093/nar/gkr419. Epub 2011 Jun 7. Nucleic Acids Res. 2011. PMID: 21652643 Free PMC article.
Template strand scrunching during DNA gap repair synthesis by human polymerase lambda.
Garcia-Diaz M, Bebenek K, Larrea AA, Havener JM, Perera L, Krahn JM, Pedersen LC, Ramsden DA, Kunkel TA. Garcia-Diaz M, et al. Among authors: krahn jm. Nat Struct Mol Biol. 2009 Sep;16(9):967-72. doi: 10.1038/nsmb.1654. Epub 2009 Aug 23. Nat Struct Mol Biol. 2009. PMID: 19701199 Free PMC article.
Crystal structure of a type II dihydrofolate reductase catalytic ternary complex.
Krahn JM, Jackson MR, DeRose EF, Howell EE, London RE. Krahn JM, et al. Biochemistry. 2007 Dec 25;46(51):14878-88. doi: 10.1021/bi701532r. Epub 2007 Dec 4. Biochemistry. 2007. PMID: 18052202 Free PMC article.
Role of the catalytic metal during polymerization by DNA polymerase lambda.
Garcia-Diaz M, Bebenek K, Krahn JM, Pedersen LC, Kunkel TA. Garcia-Diaz M, et al. Among authors: krahn jm. DNA Repair (Amst). 2007 Sep 1;6(9):1333-40. doi: 10.1016/j.dnarep.2007.03.005. Epub 2007 May 1. DNA Repair (Amst). 2007. PMID: 17475573 Free PMC article.
Magnesium-induced assembly of a complete DNA polymerase catalytic complex.
Batra VK, Beard WA, Shock DD, Krahn JM, Pedersen LC, Wilson SH. Batra VK, et al. Among authors: krahn jm. Structure. 2006 Apr;14(4):757-66. doi: 10.1016/j.str.2006.01.011. Structure. 2006. PMID: 16615916 Free PMC article.
Structural insight into the DNA polymerase beta deoxyribose phosphate lyase mechanism.
Prasad R, Batra VK, Yang XP, Krahn JM, Pedersen LC, Beard WA, Wilson SH. Prasad R, et al. Among authors: krahn jm. DNA Repair (Amst). 2005 Dec 8;4(12):1347-57. doi: 10.1016/j.dnarep.2005.08.009. Epub 2005 Sep 19. DNA Repair (Amst). 2005. PMID: 16172026
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