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High-throughput, quantitative analyses of genetic interactions in E. coli.
Typas A, Nichols RJ, Siegele DA, Shales M, Collins SR, Lim B, Braberg H, Yamamoto N, Takeuchi R, Wanner BL, Mori H, Weissman JS, Krogan NJ, Gross CA. Typas A, et al. Among authors: krogan nj. Nat Methods. 2008 Sep;5(9):781-7. doi: 10.1038/nmeth.1240. Nat Methods. 2008. PMID: 19160513 Free PMC article.
Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ, Roguev A, Patrick K, Xu J, Jahari H, Tong Z, Beltrao P, Shales M, Qu H, Collins SR, Kliegman JI, Jiang L, Kuo D, Tosti E, Kim HS, Edelmann W, Keogh MC, Greene D, Tang C, Cunningham P, Shokat KM, Cagney G, Svensson JP, Guthrie C, Espenshade PJ, Ideker T, Krogan NJ. Ryan CJ, et al. Mol Cell. 2012 Jun 8;46(5):691-704. doi: 10.1016/j.molcel.2012.05.028. Mol Cell. 2012. PMID: 22681890 Free PMC article.
Quantitative genetic-interaction mapping in mammalian cells.
Roguev A, Talbot D, Negri GL, Shales M, Cagney G, Bandyopadhyay S, Panning B, Krogan NJ. Roguev A, et al. Nat Methods. 2013 May;10(5):432-7. doi: 10.1038/nmeth.2398. Epub 2013 Feb 13. Nat Methods. 2013. PMID: 23407553 Free PMC article.
Quantitative analysis of triple-mutant genetic interactions.
Braberg H, Alexander R, Shales M, Xu J, Franks-Skiba KE, Wu Q, Haber JE, Krogan NJ. Braberg H, et al. Nat Protoc. 2014 Aug;9(8):1867-81. doi: 10.1038/nprot.2014.127. Epub 2014 Jul 10. Nat Protoc. 2014. PMID: 25010907 Free PMC article.
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