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6,247 results
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OxDBase: a database of oxygenases involved in biodegradation.
Arora PK, Kumar M, Chauhan A, Raghava GP, Jain RK. Arora PK, et al. BMC Res Notes. 2009 Apr 30;2:67. doi: 10.1186/1756-0500-2-67. BMC Res Notes. 2009. PMID: 19405962 Free PMC article.
Hmrbase: a database of hormones and their receptors.
Rashid M, Singla D, Sharma A, Kumar M, Raghava GP. Rashid M, et al. BMC Genomics. 2009 Jul 9;10:307. doi: 10.1186/1471-2164-10-307. BMC Genomics. 2009. PMID: 19589147 Free PMC article.
Prediction of nuclear proteins using SVM and HMM models.
Kumar M, Raghava GP. Kumar M, et al. BMC Bioinformatics. 2009 Jan 19;10:22. doi: 10.1186/1471-2105-10-22. BMC Bioinformatics. 2009. PMID: 19152693 Free PMC article.
COPid: composition based protein identification.
Kumar M, Thakur V, Raghava GP. Kumar M, et al. In Silico Biol. 2008;8(2):121-8. In Silico Biol. 2008. PMID: 18928200
CyclinPred: a SVM-based method for predicting cyclin protein sequences.
Kalita MK, Nandal UK, Pattnaik A, Sivalingam A, Ramasamy G, Kumar M, Raghava GP, Gupta D. Kalita MK, et al. PLoS One. 2008 Jul 2;3(7):e2605. doi: 10.1371/journal.pone.0002605. PLoS One. 2008. PMID: 18596929 Free PMC article.
Prediction of RNA binding sites in a protein using SVM and PSSM profile.
Kumar M, Gromiha MM, Raghava GP. Kumar M, et al. Proteins. 2008 Apr;71(1):189-94. doi: 10.1002/prot.21677. Proteins. 2008. PMID: 17932917
Support vector machine based prediction of glutathione S-transferase proteins.
Mishra NK, Kumar M, Raghava GP. Mishra NK, et al. Protein Pept Lett. 2007;14(6):575-80. doi: 10.2174/092986607780990046. Protein Pept Lett. 2007. PMID: 17627599
BhairPred: prediction of beta-hairpins in a protein from multiple alignment information using ANN and SVM techniques.
Kumar M, Bhasin M, Natt NK, Raghava GP. Kumar M, et al. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W154-9. doi: 10.1093/nar/gki588. Nucleic Acids Res. 2005. PMID: 15988830 Free PMC article.
M. Thornton (2002) Proc. Natl Acad. Sci. USA, 99, 11157-11162. The performance of the method was also evaluated on proteins used in the '6th community-wide experiment on the critical assessment of techniques for protein structure prediction (CASP6)'. ...
M. Thornton (2002) Proc. Natl Acad. Sci. USA, 99, 11157-11162. The performance of the method was also evaluated on proteins used in t
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