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MEGA2: molecular evolutionary genetics analysis software.
Kumar S, Tamura K, Jakobsen IB, Nei M. Kumar S, et al. Bioinformatics. 2001 Dec;17(12):1244-5. doi: 10.1093/bioinformatics/17.12.1244. Bioinformatics. 2001. PMID: 11751241
CONTACT: s.kumar@asu.edu...
CONTACT: s.kumar@asu.edu...
Single column discrepancy and dynamic max-mini optimizations for quickly finding the most parsimonious evolutionary trees.
Purdom PW Jr, Bradford PG, Tamura K, Kumar S. Purdom PW Jr, et al. Bioinformatics. 2000 Feb;16(2):140-51. doi: 10.1093/bioinformatics/16.2.140. Bioinformatics. 2000. PMID: 10842736
CONTACT: s.kumar@asu.edu...
CONTACT: s.kumar@asu.edu...
Incomplete taxon sampling is not a problem for phylogenetic inference.
Rosenberg MS, Kumar S. Rosenberg MS, et al. Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10751-6. doi: 10.1073/pnas.191248498. Epub 2001 Aug 28. Proc Natl Acad Sci U S A. 2001. PMID: 11526218 Free PMC article.
Molecular evolution of a developmental pathway: phylogenetic analyses of transforming growth factor-beta family ligands, receptors and Smad signal transducers.
Newfeld SJ, Wisotzkey RG, Kumar S. Newfeld SJ, et al. Genetics. 1999 Jun;152(2):783-95. Genetics. 1999. PMID: 10353918 Free PMC article.
From a developmental perspective we find (1) numerous phylogenetic associations not previously detected in each multigene family; (2) that there are unidentified pathway components that discriminate between type I and type II receptors; (3) that there are more Smads to be discove …
From a developmental perspective we find (1) numerous phylogenetic associations not previously detected in each multigene family; (2) that t …
Understanding human disease mutations through the use of interspecific genetic variation.
Miller MP, Kumar S. Miller MP, et al. Hum Mol Genet. 2001 Oct 1;10(21):2319-28. doi: 10.1093/hmg/10.21.2319. Hum Mol Genet. 2001. PMID: 11689479
Using Grantham's chemical difference matrix, we find that amino acid changes observed in disease patients are far more radical than the variation found among species and in non-diseased humans. ...
Using Grantham's chemical difference matrix, we find that amino acid changes observed in disease patients are far more radical than t …
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