Kumar S - Search Results

1

ITS1 versus ITS2 as DNA metabarcodes for fungi.

Blaalid R, Kumar S, Nilsson RH, Abarenkov K, Kirk PM, Kauserud H. Blaalid R, et al. Among authors: kumar s. Mol Ecol Resour. 2013 Mar;13(2):218-24. doi: 10.1111/1755-0998.12065. Epub 2013 Jan 25. Mol Ecol Resour. 2013. PMID: 23350562

2

Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing.

Blaalid R, Carlsen T, Kumar S, Halvorsen R, Ugland KI, Fontana G, Kauserud H. Blaalid R, et al. Among authors: kumar s. Mol Ecol. 2012 Apr;21(8):1897-908. doi: 10.1111/j.1365-294x.2011.05214.x. Mol Ecol. 2012. PMID: 22590726

3

CLOTU: an online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation.

Kumar S, Carlsen T, Mevik BH, Enger P, Blaalid R, Shalchian-Tabrizi K, Kauserud H. Kumar S, et al. BMC Bioinformatics. 2011 May 20;12:182. doi: 10.1186/1471-2105-12-182. BMC Bioinformatics. 2011. PMID: 21599929 Free PMC article.

4

High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples.

Kauserud H, Kumar S, Brysting AK, Nordén J, Carlsen T. Kauserud H, et al. Among authors: kumar s. Mycorrhiza. 2012 May;22(4):309-15. doi: 10.1007/s00572-011-0403-1. Epub 2011 Jul 16. Mycorrhiza. 2012. PMID: 21779811

5

Environmental microbiology through the lens of high-throughput DNA sequencing: synopsis of current platforms and bioinformatics approaches.

Logares R, Haverkamp TH, Kumar S, Lanzén A, Nederbragt AJ, Quince C, Kauserud H. Logares R, et al. Among authors: kumar s. J Microbiol Methods. 2012 Oct;91(1):106-13. doi: 10.1016/j.mimet.2012.07.017. Epub 2012 Jul 28. J Microbiol Methods. 2012. PMID: 22849829 Review.

6

AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses.

Kumar S, Skjaeveland A, Orr RJ, Enger P, Ruden T, Mevik BH, Burki F, Botnen A, Shalchian-Tabrizi K. Kumar S, et al. BMC Bioinformatics. 2009 Oct 28;10:357. doi: 10.1186/1471-2105-10-357. BMC Bioinformatics. 2009. PMID: 19863793 Free PMC article.

7

BIR Pipeline for Preparation of Phylogenomic Data.

Kumar S, Krabberød AK, Neumann RS, Michalickova K, Zhao S, Zhang X, Shalchian-Tabrizi K. Kumar S, et al. Evol Bioinform Online. 2015 Apr 27;11:79-83. doi: 10.4137/EBO.S10189. eCollection 2015. Evol Bioinform Online. 2015. PMID: 25987827 Free PMC article. Review.

8

BLASTGrabber: a bioinformatic tool for visualization, analysis and sequence selection of massive BLAST data.

Neumann RS, Kumar S, Haverkamp TH, Shalchian-Tabrizi K. Neumann RS, et al. Among authors: kumar s. BMC Bioinformatics. 2014 May 5;15:128. doi: 10.1186/1471-2105-15-128. BMC Bioinformatics. 2014. PMID: 24885091 Free PMC article.

9

Correction: Efficacy and safety of ciprofol versus propofol for induction and maintenance of general anesthesia: a systematic review and meta-analysis.

Hudaib M, Malik H, Zakir SJ, Rabbani S, Gnanendran D, Syed ARS, Suri NF, Khan J, Iqbal A, Hussain N, Abdullah M, Kumar S, Khatri M, Varrassi G. Hudaib M, et al. Among authors: kumar s. J Anesth Analg Crit Care. 2024 Apr 24;4(1):26. doi: 10.1186/s44158-024-00162-6. J Anesth Analg Crit Care. 2024. PMID: 38659071 No abstract available.

10

Perinatal Science International: A new meeting of the European Association of Perinatal Medicine.

Modi N, Jacobsson B, de Campos DA; Perinatal Science International Writing Group. Modi N, et al. Eur J Obstet Gynecol Reprod Biol. 2024 Apr 15;297:159-160. doi: 10.1016/j.ejogrb.2024.04.018. Online ahead of print. Eur J Obstet Gynecol Reprod Biol. 2024. PMID: 38657520 No abstract available.

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