Kuo BY - Search Results

1

SAGE2Splice: unmapped SAGE tags reveal novel splice junctions.

Kuo BY, Chen Y, Bohacec S, Johansson O, Wasserman WW, Simpson EM. Kuo BY, et al. PLoS Comput Biol. 2006 Apr;2(4):e34. doi: 10.1371/journal.pcbi.0020034. Epub 2006 Apr 28. PLoS Comput Biol. 2006. PMID: 16683015 Free PMC article.

2

ArrayPipe: a flexible processing pipeline for microarray data.

Hokamp K, Roche FM, Acab M, Rousseau ME, Kuo B, Goode D, Aeschliman D, Bryan J, Babiuk LA, Hancock RE, Brinkman FS. Hokamp K, et al. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W457-9. doi: 10.1093/nar/gkh446. Nucleic Acids Res. 2004. PMID: 15215429 Free PMC article.

3

Gene expression profiling to identify potentially relevant disease outcomes and support human health risk assessment for carbon black nanoparticle exposure.

Bourdon JA, Williams A, Kuo B, Moffat I, White PA, Halappanavar S, Vogel U, Wallin H, Yauk CL. Bourdon JA, et al. Toxicology. 2013 Jan 7;303:83-93. doi: 10.1016/j.tox.2012.10.014. Epub 2012 Nov 9. Toxicology. 2013. PMID: 23146762 Free PMC article.

4

The TGx-28.65 biomarker online application for analysis of transcriptomics data to identify DNA damage-inducing chemicals in human cell cultures.

Jackson MA, Yang L, Lea I, Rashid A, Kuo B, Williams A, Lyn Yauk C, Fostel J. Jackson MA, et al. Environ Mol Mutagen. 2017 Aug;58(7):529-535. doi: 10.1002/em.22114. Epub 2017 Aug 2. Environ Mol Mutagen. 2017. PMID: 28766826

5

iHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP website.

Good BM, Kawas EA, Kuo BY, Wilkinson MD. Good BM, et al. Among authors: kuo by. BMC Bioinformatics. 2006 Dec 15;7:534. doi: 10.1186/1471-2105-7-534. BMC Bioinformatics. 2006. PMID: 17173692 Free PMC article.

6

A framework for the use of single-chemical transcriptomics data in predicting the hazards associated with complex mixtures of polycyclic aromatic hydrocarbons.

Labib S, Williams A, Kuo B, Yauk CL, White PA, Halappanavar S. Labib S, et al. Arch Toxicol. 2017 Jul;91(7):2599-2616. doi: 10.1007/s00204-016-1891-8. Epub 2016 Nov 17. Arch Toxicol. 2017. PMID: 27858113 Free PMC article.

7

Pulmonary gene and microRNA expression changes in mice exposed to benzo(a)pyrene by oral gavage.

Halappanavar S, Wu D, Williams A, Kuo B, Godschalk RW, Van Schooten FJ, Yauk CL. Halappanavar S, et al. Toxicology. 2011 Jul 29;285(3):133-41. doi: 10.1016/j.tox.2011.04.011. Epub 2011 Apr 30. Toxicology. 2011. PMID: 21569818 Free article.

8

Comparison of toxicogenomics and traditional approaches to inform mode of action and points of departure in human health risk assessment of benzo[a]pyrene in drinking water.

Moffat I, Chepelev N, Labib S, Bourdon-Lacombe J, Kuo B, Buick JK, Lemieux F, Williams A, Halappanavar S, Malik A, Luijten M, Aubrecht J, Hyduke DR, Fornace AJ Jr, Swartz CD, Recio L, Yauk CL. Moffat I, et al. Crit Rev Toxicol. 2015 Jan;45(1):1-43. doi: 10.3109/10408444.2014.973934. Crit Rev Toxicol. 2015. PMID: 25605026 Free PMC article. Review.

9

Integrating toxicogenomics into human health risk assessment: lessons learned from the benzo[a]pyrene case study.

Chepelev NL, Moffat ID, Labib S, Bourdon-Lacombe J, Kuo B, Buick JK, Lemieux F, Malik AI, Halappanavar S, Williams A, Yauk CL. Chepelev NL, et al. Crit Rev Toxicol. 2015 Jan;45(1):44-52. doi: 10.3109/10408444.2014.973935. Crit Rev Toxicol. 2015. PMID: 25605027 Review.

10

Toxicogenomic assessment of liver responses following subchronic exposure to furan in Fischer F344 rats.

Dong H, Gill S, Curran IH, Williams A, Kuo B, Wade MG, Yauk CL. Dong H, et al. Arch Toxicol. 2016 Jun;90(6):1351-67. doi: 10.1007/s00204-015-1561-2. Epub 2015 Jul 21. Arch Toxicol. 2016. PMID: 26194646 Free PMC article.

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