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Variations in stress sensitivity and genomic expression in diverse S. cerevisiae isolates.
Kvitek DJ, Will JL, Gasch AP. Kvitek DJ, et al. PLoS Genet. 2008 Oct;4(10):e1000223. doi: 10.1371/journal.pgen.1000223. Epub 2008 Oct 17. PLoS Genet. 2008. PMID: 18927628 Free PMC article.
Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments.
Dunn B, Richter C, Kvitek DJ, Pugh T, Sherlock G. Dunn B, et al. Among authors: kvitek dj. Genome Res. 2012 May;22(5):908-24. doi: 10.1101/gr.130310.111. Epub 2012 Feb 27. Genome Res. 2012. PMID: 22369888 Free PMC article.
Phenotypic and genotypic convergences are influenced by historical contingency and environment in yeast.
Spor A, Kvitek DJ, Nidelet T, Martin J, Legrand J, Dillmann C, Bourgais A, de Vienne D, Sherlock G, Sicard D. Spor A, et al. Among authors: kvitek dj. Evolution. 2014 Mar;68(3):772-790. doi: 10.1111/evo.12302. Epub 2013 Nov 25. Evolution. 2014. PMID: 24164389 Free PMC article.
Heterozygote Advantage Is a Common Outcome of Adaptation in Saccharomyces cerevisiae.
Sellis D, Kvitek DJ, Dunn B, Sherlock G, Petrov DA. Sellis D, et al. Among authors: kvitek dj. Genetics. 2016 Jul;203(3):1401-13. doi: 10.1534/genetics.115.185165. Epub 2016 May 18. Genetics. 2016. PMID: 27194750 Free PMC article.
Whole genome, whole population sequencing reveals that loss of signaling networks is the major adaptive strategy in a constant environment.
Kvitek DJ, Sherlock G. Kvitek DJ, et al. PLoS Genet. 2013 Nov;9(11):e1003972. doi: 10.1371/journal.pgen.1003972. Epub 2013 Nov 21. PLoS Genet. 2013. PMID: 24278038 Free PMC article.
Reciprocal sign epistasis between frequently experimentally evolved adaptive mutations causes a rugged fitness landscape.
Kvitek DJ, Sherlock G. Kvitek DJ, et al. PLoS Genet. 2011 Apr;7(4):e1002056. doi: 10.1371/journal.pgen.1002056. Epub 2011 Apr 28. PLoS Genet. 2011. PMID: 21552329 Free PMC article.
Transient genotype-by-environment interactions following environmental shock provide a source of expression variation for essential genes.
Eng KH, Kvitek DJ, Keles S, Gasch AP. Eng KH, et al. Among authors: kvitek dj. Genetics. 2010 Feb;184(2):587-93. doi: 10.1534/genetics.109.107268. Epub 2009 Dec 4. Genetics. 2010. PMID: 19966067 Free PMC article.
The Valley-of-Death: reciprocal sign epistasis constrains adaptive trajectories in a constant, nutrient limiting environment.
Chiotti KE, Kvitek DJ, Schmidt KH, Koniges G, Schwartz K, Donckels EA, Rosenzweig F, Sherlock G. Chiotti KE, et al. Among authors: kvitek dj. Genomics. 2014 Dec;104(6 Pt A):431-7. doi: 10.1016/j.ygeno.2014.10.011. Epub 2014 Nov 1. Genomics. 2014. PMID: 25449178 Free PMC article.
Incorporating Spinal Muscular Atrophy Analysis by Next-Generation Sequencing into a Comprehensive Multigene Panel for Neuromuscular Disorders.
Tan CA, Westbrook MJ, Truty R, Kvitek DJ, Kennemer M, Winder TL, Shieh PB. Tan CA, et al. Among authors: kvitek dj. Genet Test Mol Biomarkers. 2020 Oct;24(10):616-624. doi: 10.1089/gtmb.2019.0282. Epub 2020 Jul 23. Genet Test Mol Biomarkers. 2020. PMID: 32721234
Acrophiarin (antibiotic S31794/F-1) from Penicillium arenicola shares biosynthetic features with both Aspergillus- and Leotiomycete-type echinocandins.
Lan N, Perlatti B, Kvitek DJ, Wiemann P, Harvey CJB, Frisvad J, An Z, Bills GF. Lan N, et al. Among authors: kvitek dj. Environ Microbiol. 2020 Jun;22(6):2292-2311. doi: 10.1111/1462-2920.15004. Epub 2020 Apr 14. Environ Microbiol. 2020. PMID: 32239586 Free PMC article.
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