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A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes.
Gupta S, Gallavotti A, Stryker GA, Schmidt RJ, Lal SK. Gupta S, et al. Among authors: lal sk. Plant Mol Biol. 2005 Jan;57(1):115-27. doi: 10.1007/s11103-004-6636-z. Plant Mol Biol. 2005. PMID: 15821872
Differential pre-mRNA Splicing Alters the Transcript Diversity of Helitrons Between the Maize Inbred Lines.
Lynch BT, Patrick TL, Moreno JJ, Siebert AE, Klusman KM, Shodja DN, Hannah LC, Lal SK. Lynch BT, et al. Among authors: lal sk. G3 (Bethesda). 2015 Jun 12;5(8):1703-11. doi: 10.1534/g3.115.018630. G3 (Bethesda). 2015. PMID: 26070844 Free PMC article.
Discovery and expression analysis of alternative splicing events conserved among plant SR proteins.
Rauch HB, Patrick TL, Klusman KM, Battistuzzi FU, Mei W, Brendel VP, Lal SK. Rauch HB, et al. Among authors: lal sk. Mol Biol Evol. 2014 Mar;31(3):605-13. doi: 10.1093/molbev/mst238. Epub 2013 Dec 19. Mol Biol Evol. 2014. PMID: 24356560
Gene capture by Helitron transposons reshuffles the transcriptome of maize.
Barbaglia AM, Klusman KM, Higgins J, Shaw JR, Hannah LC, Lal SK. Barbaglia AM, et al. Among authors: lal sk. Genetics. 2012 Mar;190(3):965-75. doi: 10.1534/genetics.111.136176. Epub 2011 Dec 14. Genetics. 2012. PMID: 22174072 Free PMC article.
Alternative splicing expression of U1 snRNP 70K gene is evolutionary conserved between different plant species.
Gupta S, Ciungu A, Jameson N, Lal SK. Gupta S, et al. Among authors: lal sk. DNA Seq. 2006 Aug;17(4):254-61. doi: 10.1080/10425170600856642. DNA Seq. 2006. PMID: 17312944
Helitrons contribute to the lack of gene colinearity observed in modern maize inbreds.
Lal SK, Hannah LC. Lal SK, et al. Proc Natl Acad Sci U S A. 2005 Jul 19;102(29):9993-4. doi: 10.1073/pnas.0504713102. Epub 2005 Jul 11. Proc Natl Acad Sci U S A. 2005. PMID: 16009929 Free PMC article. No abstract available.
The maize genome contains a helitron insertion.
Lal SK, Giroux MJ, Brendel V, Vallejos CE, Hannah LC. Lal SK, et al. Plant Cell. 2003 Feb;15(2):381-91. doi: 10.1105/tpc.008375. Plant Cell. 2003. PMID: 12566579 Free PMC article.
Two novel arginine/serine (SR) proteins in maize are differentially spliced and utilize non-canonical splice sites.
Gupta S, Wang BB, Stryker GA, Zanetti ME, Lal SK. Gupta S, et al. Among authors: lal sk. Biochim Biophys Acta. 2005 May 1;1728(3):105-14. doi: 10.1016/j.bbaexp.2005.01.004. Epub 2005 Feb 23. Biochim Biophys Acta. 2005. PMID: 15780972
Helitron mediated amplification of cytochrome P450 monooxygenase gene in maize.
Jameson N, Georgelis N, Fouladbash E, Martens S, Hannah LC, Lal S. Jameson N, et al. Plant Mol Biol. 2008 Jun;67(3):295-304. doi: 10.1007/s11103-008-9318-4. Plant Mol Biol. 2008. PMID: 18327644
Comparison of RNA expression profiles based on maize expressed sequence tag frequency analysis and micro-array hybridization.
Fernandes J, Brendel V, Gai X, Lal S, Chandler VL, Elumalai RP, Galbraith DW, Pierson EA, Walbot V. Fernandes J, et al. Plant Physiol. 2002 Mar;128(3):896-910. doi: 10.1104/pp.010681. Plant Physiol. 2002. PMID: 11891246 Free PMC article.
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