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Structure prediction for CASP8 with all-atom refinement using Rosetta.
Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, Baker D. Raman S, et al. Proteins. 2009;77 Suppl 9(0 9):89-99. doi: 10.1002/prot.22540. Proteins. 2009. PMID: 19701941 Free PMC article.
NMR structure determination for larger proteins using backbone-only data.
Raman S, Lange OF, Rossi P, Tyka M, Wang X, Aramini J, Liu G, Ramelot TA, Eletsky A, Szyperski T, Kennedy MA, Prestegard J, Montelione GT, Baker D. Raman S, et al. Among authors: lange of. Science. 2010 Feb 19;327(5968):1014-8. doi: 10.1126/science.1183649. Epub 2010 Feb 4. Science. 2010. PMID: 20133520 Free PMC article.
Improving 3D structure prediction from chemical shift data.
van der Schot G, Zhang Z, Vernon R, Shen Y, Vranken WF, Baker D, Bonvin AM, Lange OF. van der Schot G, et al. Among authors: lange of. J Biomol NMR. 2013 Sep;57(1):27-35. doi: 10.1007/s10858-013-9762-6. Epub 2013 Aug 3. J Biomol NMR. 2013. PMID: 23912841
Consistent blind protein structure generation from NMR chemical shift data.
Shen Y, Lange O, Delaglio F, Rossi P, Aramini JM, Liu G, Eletsky A, Wu Y, Singarapu KK, Lemak A, Ignatchenko A, Arrowsmith CH, Szyperski T, Montelione GT, Baker D, Bax A. Shen Y, et al. Proc Natl Acad Sci U S A. 2008 Mar 25;105(12):4685-90. doi: 10.1073/pnas.0800256105. Epub 2008 Mar 7. Proc Natl Acad Sci U S A. 2008. PMID: 18326625 Free PMC article.
78 results