Lareau LF - Search Results

1

Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements.

Lareau LF, Inada M, Green RE, Wengrod JC, Brenner SE. Lareau LF, et al. Nature. 2007 Apr 19;446(7138):926-9. doi: 10.1038/nature05676. Epub 2007 Mar 14. Nature. 2007. PMID: 17361132

2

Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes.

Green RE, Lewis BP, Hillman RT, Blanchette M, Lareau LF, Garnett AT, Rio DC, Brenner SE. Green RE, et al. Among authors: lareau lf. Bioinformatics. 2003;19 Suppl 1:i118-21. doi: 10.1093/bioinformatics/btg1015. Bioinformatics. 2003. PMID: 12855447

3

The evolving roles of alternative splicing.

Lareau LF, Green RE, Bhatnagar RS, Brenner SE. Lareau LF, et al. Curr Opin Struct Biol. 2004 Jun;14(3):273-82. doi: 10.1016/j.sbi.2004.05.002. Curr Opin Struct Biol. 2004. PMID: 15193306 Review.

4

The coupling of alternative splicing and nonsense-mediated mRNA decay.

Lareau LF, Brooks AN, Soergel DA, Meng Q, Brenner SE. Lareau LF, et al. Adv Exp Med Biol. 2007;623:190-211. doi: 10.1007/978-0-387-77374-2_12. Adv Exp Med Biol. 2007. PMID: 18380348 Review.

5

Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila.

Hansen KD, Lareau LF, Blanchette M, Green RE, Meng Q, Rehwinkel J, Gallusser FL, Izaurralde E, Rio DC, Dudoit S, Brenner SE. Hansen KD, et al. Among authors: lareau lf. PLoS Genet. 2009 Jun;5(6):e1000525. doi: 10.1371/journal.pgen.1000525. Epub 2009 Jun 19. PLoS Genet. 2009. PMID: 19543372 Free PMC article.

6

Regulation of splicing factors by alternative splicing and NMD is conserved between kingdoms yet evolutionarily flexible.

Lareau LF, Brenner SE. Lareau LF, et al. Mol Biol Evol. 2015 Apr;32(4):1072-9. doi: 10.1093/molbev/msv002. Epub 2015 Jan 8. Mol Biol Evol. 2015. PMID: 25576366 Free PMC article.

7

Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling.

Rice ES, Kohno S, John JS, Pham S, Howard J, Lareau LF, O'Connell BL, Hickey G, Armstrong J, Deran A, Fiddes I, Platt RN 2nd, Gresham C, McCarthy F, Kern C, Haan D, Phan T, Schmidt C, Sanford JR, Ray DA, Paten B, Guillette LJ Jr, Green RE. Rice ES, et al. Among authors: lareau lf. Genome Res. 2017 May;27(5):686-696. doi: 10.1101/gr.213595.116. Epub 2017 Jan 30. Genome Res. 2017. PMID: 28137821 Free PMC article.

8

Accurate design of translational output by a neural network model of ribosome distribution.

Tunney R, McGlincy NJ, Graham ME, Naddaf N, Pachter L, Lareau LF. Tunney R, et al. Among authors: lareau lf. Nat Struct Mol Biol. 2018 Jul;25(7):577-582. doi: 10.1038/s41594-018-0080-2. Epub 2018 Jul 2. Nat Struct Mol Biol. 2018. PMID: 29967537 Free PMC article.

9

Coverage-dependent bias creates the appearance of binary splicing in single cells.

Buen Abad Najar CF, Yosef N, Lareau LF. Buen Abad Najar CF, et al. Among authors: lareau lf. Elife. 2020 Jun 29;9:e54603. doi: 10.7554/eLife.54603. Elife. 2020. PMID: 32597758 Free PMC article.

10

Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments.

Lareau LF, Hite DH, Hogan GJ, Brown PO. Lareau LF, et al. Elife. 2014 May 9;3:e01257. doi: 10.7554/eLife.01257. Elife. 2014. PMID: 24842990 Free PMC article.

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