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Structural plasticity of substrate selection by activation-induced cytidine deaminase as a regulator of its genome-wide mutagenic activity.

King JJ, Larijani M. King JJ, et al. Among authors: larijani m. FEBS Lett. 2021 Jan;595(1):3-13. doi: 10.1002/1873-3468.13962. Epub 2020 Nov 5. FEBS Lett. 2021. PMID: 33089497

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Activation-induced cytidine deaminase can target multiple topologies of double-stranded DNA in a transcription-independent manner.

Branton SA, Ghorbani A, Bolt BN, Fifield H, Berghuis LM, Larijani M. Branton SA, et al. Among authors: larijani m. FASEB J. 2020 Jul;34(7):9245-9268. doi: 10.1096/fj.201903036RR. Epub 2020 May 21. FASEB J. 2020. PMID: 32437054

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AID, APOBEC3A and APOBEC3B efficiently deaminate deoxycytidines neighboring DNA damage induced by oxidation or alkylation.

Diamond CP, Im J, Button EA, Huebert DNG, King JJ, Borzooee F, Abdouni HS, Bacque L, McCarthy E, Fifield H, Berghuis LM, Larijani M. Diamond CP, et al. Among authors: larijani m. Biochim Biophys Acta Gen Subj. 2019 Nov;1863(11):129415. doi: 10.1016/j.bbagen.2019.129415. Epub 2019 Aug 9. Biochim Biophys Acta Gen Subj. 2019. PMID: 31404619

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Characterization and Transcript Expression Analyses of Atlantic Cod Viperin.

Eslamloo K, Ghorbani A, Xue X, Inkpen SM, Larijani M, Rise ML. Eslamloo K, et al. Among authors: larijani m. Front Immunol. 2019 Mar 6;10:311. doi: 10.3389/fimmu.2019.00311. eCollection 2019. Front Immunol. 2019. PMID: 30894853 Free PMC article.

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Pichia pastoris as a host for production and isolation of mutagenic AID/APOBEC enzymes involved in cancer and immunity.

Borzooee F, Larijani M. Borzooee F, et al. Among authors: larijani m. N Biotechnol. 2019 Jul 25;51:67-79. doi: 10.1016/j.nbt.2019.02.006. Epub 2019 Feb 27. N Biotechnol. 2019. PMID: 30822538

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APOBEC3G Regulation of the Evolutionary Race Between Adaptive Immunity and Viral Immune Escape Is Deeply Imprinted in the HIV Genome.

Borzooee F, Joris KD, Grant MD, Larijani M. Borzooee F, et al. Among authors: larijani m. Front Immunol. 2019 Jan 11;9:3032. doi: 10.3389/fimmu.2018.03032. eCollection 2018. Front Immunol. 2019. PMID: 30687306 Free PMC article.

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Enhancement of Cancer-Specific Protoporphyrin IX Fluorescence by Targeting Oncogenic Ras/MEK Pathway.

Yoshioka E, Chelakkot VS, Licursi M, Rutihinda SG, Som J, Derwish L, King JJ, Pongnopparat T, Mearow K, Larijani M, Dorward AM, Hirasawa K. Yoshioka E, et al. Among authors: larijani m. Theranostics. 2018 Mar 8;8(8):2134-2146. doi: 10.7150/thno.22641. eCollection 2018. Theranostics. 2018. PMID: 29721068 Free PMC article.

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A licensing step links AID to transcription elongation for mutagenesis in B cells.

Methot SP, Litzler LC, Subramani PG, Eranki AK, Fifield H, Patenaude AM, Gilmore JC, Santiago GE, Bagci H, Côté JF, Larijani M, Verdun RE, Di Noia JM. Methot SP, et al. Among authors: larijani m. Nat Commun. 2018 Mar 28;9(1):1248. doi: 10.1038/s41467-018-03387-6. Nat Commun. 2018. PMID: 29593215 Free PMC article.

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Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys.

Holland SJ, Berghuis LM, King JJ, Iyer LM, Sikora K, Fifield H, Peter S, Quinlan EM, Sugahara F, Shingate P, Trancoso I, Iwanami N, Temereva E, Strohmeier C, Kuratani S, Venkatesh B, Evanno G, Aravind L, Schorpp M, Larijani M, Boehm T. Holland SJ, et al. Among authors: larijani m. Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):E3211-E3220. doi: 10.1073/pnas.1720871115. Epub 2018 Mar 19. Proc Natl Acad Sci U S A. 2018. PMID: 29555777 Free PMC article.

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Viral subversion of APOBEC3s: Lessons for anti-tumor immunity and tumor immunotherapy.

Borzooee F, Asgharpour M, Quinlan E, Grant MD, Larijani M. Borzooee F, et al. Among authors: larijani m. Int Rev Immunol. 2018 May 4;37(3):151-164. doi: 10.1080/08830185.2017.1403596. Epub 2017 Dec 6. Int Rev Immunol. 2018. PMID: 29211501 Review.

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