Lassmann T - Search Results

1

SAMStat: monitoring biases in next generation sequencing data.

Lassmann T, Hayashizaki Y, Daub CO. Lassmann T, et al. Bioinformatics. 2011 Jan 1;27(1):130-1. doi: 10.1093/bioinformatics/btq614. Epub 2010 Nov 18. Bioinformatics. 2011. PMID: 21088025 Free PMC article.

2

Expression Levels of Therapeutic Targets as Indicators of Sensitivity to Targeted Therapeutics.

Roy R, Winteringham LN, Lassmann T, Forrest ARR. Roy R, et al. Among authors: lassmann t. Mol Cancer Ther. 2019 Dec;18(12):2480-2489. doi: 10.1158/1535-7163.MCT-19-0273. Epub 2019 Aug 29. Mol Cancer Ther. 2019. PMID: 31467181

3

Personalised analytics for rare disease diagnostics.

Anderson D, Baynam G, Blackwell JM, Lassmann T. Anderson D, et al. Among authors: lassmann t. Nat Commun. 2019 Nov 21;10(1):5274. doi: 10.1038/s41467-019-13345-5. Nat Commun. 2019. PMID: 31754101 Free PMC article.

4

Reference exome data for Australian Aboriginal populations to support health-based research.

Weeks AL, D'Antoine HA, McKinnon M, Syn G, Bessarab D, Brown N, Tong SYC, Reményi B, Steer A, Gray LA, Inouye M, Carapetis JR, Blackwell JM, Lassmann T. Weeks AL, et al. Among authors: lassmann t. Sci Data. 2020 Apr 29;7(1):129. doi: 10.1038/s41597-020-0463-1. Sci Data. 2020. PMID: 32350262 Free PMC article.

5

Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows.

Denisenko E, Guo BB, Jones M, Hou R, de Kock L, Lassmann T, Poppe D, Clément O, Simmons RK, Lister R, Forrest ARR. Denisenko E, et al. Among authors: lassmann t. Genome Biol. 2020 Jun 2;21(1):130. doi: 10.1186/s13059-020-02048-6. Genome Biol. 2020. PMID: 32487174 Free PMC article.

6

Bilateral murine tumor models for characterizing the response to immune checkpoint blockade.

Zemek RM, Fear VS, Forbes C, de Jong E, Casey TH, Boon L, Lassmann T, Bosco A, Millward MJ, Nowak AK, Lake RA, Lesterhuis WJ. Zemek RM, et al. Among authors: lassmann t. Nat Protoc. 2020 May;15(5):1628-1648. doi: 10.1038/s41596-020-0299-3. Epub 2020 Apr 1. Nat Protoc. 2020. PMID: 32238953

7

Automatic extraction of reliable regions from multiple sequence alignments.

Lassmann T, Sonnhammer EL. Lassmann T, et al. BMC Bioinformatics. 2007 May 24;8 Suppl 5(Suppl 5):S9. doi: 10.1186/1471-2105-8-S5-S9. BMC Bioinformatics. 2007. PMID: 17570868 Free PMC article.

8

FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions.

Severin J, Waterhouse AM, Kawaji H, Lassmann T, van Nimwegen E, Balwierz PJ, de Hoon MJ, Hume DA, Carninci P, Hayashizaki Y, Suzuki H, Daub CO, Forrest AR. Severin J, et al. Among authors: lassmann t. Genome Biol. 2009;10(4):R39. doi: 10.1186/gb-2009-10-4-r39. Epub 2009 Apr 19. Genome Biol. 2009. PMID: 19374773 Free PMC article.

9

TagDust--a program to eliminate artifacts from next generation sequencing data.

Lassmann T, Hayashizaki Y, Daub CO. Lassmann T, et al. Bioinformatics. 2009 Nov 1;25(21):2839-40. doi: 10.1093/bioinformatics/btp527. Epub 2009 Sep 7. Bioinformatics. 2009. PMID: 19737799 Free PMC article.

10

Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries.

de Hoon MJ, Taft RJ, Hashimoto T, Kanamori-Katayama M, Kawaji H, Kawano M, Kishima M, Lassmann T, Faulkner GJ, Mattick JS, Daub CO, Carninci P, Kawai J, Suzuki H, Hayashizaki Y. de Hoon MJ, et al. Among authors: lassmann t. Genome Res. 2010 Feb;20(2):257-64. doi: 10.1101/gr.095273.109. Epub 2010 Jan 5. Genome Res. 2010. PMID: 20051556 Free PMC article.

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