Ribosomal DNA localization on Lathyrus species chromosomes by FISH

Hoda B M Ali; Samira A Osman

doi:10.1186/s43141-020-00075-1

Ribosomal DNA localization on Lathyrus species chromosomes by FISH

J Genet Eng Biotechnol. 2020 Oct 20;18(1):63. doi: 10.1186/s43141-020-00075-1.

Authors

Hoda B M Ali¹, Samira A Osman²

Affiliations

¹ Genetics and Cytology Department, Genetic Engineering and Biotechnology Research Division, National Research Centre, Giza, P.O. 12622, Egypt. bmhoda66@hotmail.com.
² Genetics and Cytology Department, Genetic Engineering and Biotechnology Research Division, National Research Centre, Giza, P.O. 12622, Egypt.

Abstract

Background: Fluorescence In Situ Hybridization (FISH) played an essential role to locate the ribosomal RNA genes on the chromosomes that offered a new tool to study the chromosome structure and evolution in plant. The 45S and 5S rRNA genes are independent and localized at one or more loci per the chromosome complement, their positions along chromosomes offer useful markers for chromosome discriminations. In the current study FISH has been performed to locate 45S and 5S rRNA genes on the chromosomes of nine Lathyrus species belong to five different sections, all have chromosome number 2n=14, Lathyrus gorgoni Parl, Lathyrus hirsutus L., Lathyrus amphicarpos L., Lathyrus odoratus L., Lathyrus sphaericus Retz, Lathyrus incospicuus L, Lathyrus paranensis Burkart, Lathyrus nissolia L., and Lathyrus articulates L.

Results: The revealed loci of 45S and 5S rDNA by FISH on metaphase chromosomes of the examined species were as follow: all of the studied species have one 45S rDNA locus and one 5S rDNA locus except L. odoratus L., L. amphicarpos L. and L. sphaericus Retz L. have two loci of 5S rDNA. Three out of the nine examined species have the loci of 45S and 5S rRNA genes on the opposite arms of the same chromosome (L. nissolia L., L. amphicarpos L., and L. incospicuus L.), while L. hirsutus L. has both loci on the same chromosome arm. The other five species showed the loci of the two types of rDNA on different chromosomes.

Conclusion: The detected 5S and 45S rDNA loci in Lathyrus could be used as chromosomal markers to discriminate the chromosome pairs of the examined species. FISH could discriminate only one chromosome pair out of the seven pairs in three species, in L. hirsutus L., L. nissolia L. and L. incospicuus L., and two chromosome pairs in five species, in L. paranensis Burkart, L. odoratus L., L. amphicarpos L., L. gorgoni Parl. and L. articulatus L., while it could discriminate three chromosome pairs in L. sphaericus Retz. these results could contribute into the physical genome mapping of Lathyrus species and the evolution of rDNA patterns by FISH in the coming studies in future.

Keywords: FISH; Lathyrus; rRNA genes.