Law CW - Search Results

1

voom: Precision weights unlock linear model analysis tools for RNA-seq read counts.

Law CW, Chen Y, Shi W, Smyth GK. Law CW, et al. Genome Biol. 2014 Feb 3;15(2):R29. doi: 10.1186/gb-2014-15-2-r29. Genome Biol. 2014. PMID: 24485249 Free PMC article.

2

Isoform prefiltering improves performance of count-based methods for analysis of differential transcript usage.

Soneson C, Matthes KL, Nowicka M, Law CW, Robinson MD. Soneson C, et al. Among authors: law cw. Genome Biol. 2016 Jan 26;17:12. doi: 10.1186/s13059-015-0862-3. Genome Biol. 2016. PMID: 26813113 Free PMC article.

3

Germline heterozygous mutations in Nxf1 perturb RNA metabolism and trigger thrombocytopenia and lymphopenia in mice.

Chappaz S, Law CW, Dowling MR, Carey KT, Lane RM, Ngo LH, Wickramasinghe VO, Smyth GK, Ritchie ME, Kile BT. Chappaz S, et al. Among authors: law cw. Blood Adv. 2020 Apr 14;4(7):1270-1283. doi: 10.1182/bloodadvances.2019001323. Blood Adv. 2020. PMID: 32236527 Free PMC article.

4

A guide to creating design matrices for gene expression experiments.

Law CW, Zeglinski K, Dong X, Alhamdoosh M, Smyth GK, Ritchie ME. Law CW, et al. F1000Res. 2020 Dec 10;9:1444. doi: 10.12688/f1000research.27893.1. eCollection 2020. F1000Res. 2020. PMID: 33604029 Free PMC article.

5

RNA-seq mixology: designing realistic control experiments to compare protocols and analysis methods.

Holik AZ, Law CW, Liu R, Wang Z, Wang W, Ahn J, Asselin-Labat ML, Smyth GK, Ritchie ME. Holik AZ, et al. Among authors: law cw. Nucleic Acids Res. 2017 Mar 17;45(5):e30. doi: 10.1093/nar/gkw1063. Nucleic Acids Res. 2017. PMID: 27899618 Free PMC article.

6

limma powers differential expression analyses for RNA-sequencing and microarray studies.

Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W, Smyth GK. Ritchie ME, et al. Among authors: law cw. Nucleic Acids Res. 2015 Apr 20;43(7):e47. doi: 10.1093/nar/gkv007. Epub 2015 Jan 20. Nucleic Acids Res. 2015. PMID: 25605792 Free PMC article.

7

RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR.

Law CW, Alhamdoosh M, Su S, Dong X, Tian L, Smyth GK, Ritchie ME. Law CW, et al. F1000Res. 2016 Jun 17;5:ISCB Comm J-1408. doi: 10.12688/f1000research.9005.3. eCollection 2016. F1000Res. 2016. PMID: 27441086 Free PMC article.

8

Glimma: interactive graphics for gene expression analysis.

Su S, Law CW, Ah-Cann C, Asselin-Labat ML, Blewitt ME, Ritchie ME. Su S, et al. Among authors: law cw. Bioinformatics. 2017 Jul 1;33(13):2050-2052. doi: 10.1093/bioinformatics/btx094. Bioinformatics. 2017. PMID: 28203714 Free PMC article.

9

The impact of influenza pulmonary infection and inflammation on vagal bronchopulmonary sensory neurons.

Verzele NAJ, Chua BY, Law CW, Zhang A, Ritchie ME, Wightman O, Edwards IN, Hulme KD, Bloxham CJ, Bielefeldt-Ohmann H, Trewella MW, Moe AAK, Chew KY, Mazzone SB, Short KR, McGovern AE. Verzele NAJ, et al. Among authors: law cw. FASEB J. 2021 Mar;35(3):e21320. doi: 10.1096/fj.202001509R. FASEB J. 2021. PMID: 33660333

10

Covering all your bases: incorporating intron signal from RNA-seq data.

Lee S, Zhang AY, Su S, Ng AP, Holik AZ, Asselin-Labat ML, Ritchie ME, Law CW. Lee S, et al. Among authors: law cw. NAR Genom Bioinform. 2020 Sep 22;2(3):lqaa073. doi: 10.1093/nargab/lqaa073. eCollection 2020 Sep. NAR Genom Bioinform. 2020. PMID: 33575621 Free PMC article.

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