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Comparing immobilized kinase inhibitors and covalent ATP probes for proteomic profiling of kinase expression and drug selectivity.
Lemeer S, Zörgiebel C, Ruprecht B, Kohl K, Kuster B. Lemeer S, et al. J Proteome Res. 2013 Apr 5;12(4):1723-31. doi: 10.1021/pr301073j. Epub 2013 Mar 28. J Proteome Res. 2013. PMID: 23495751
Online automated in vivo zebrafish phosphoproteomics: from large-scale analysis down to a single embryo.
Lemeer S, Pinkse MW, Mohammed S, van Breukelen B, den Hertog J, Slijper M, Heck AJ. Lemeer S, et al. J Proteome Res. 2008 Apr;7(4):1555-64. doi: 10.1021/pr700667w. Epub 2008 Feb 29. J Proteome Res. 2008. PMID: 18307296
Chip-Based Enrichment and NanoLC-MS/MS Analysis of Phosphopeptides from Whole Lysates.
Mohammed S, Kraiczek K, Pinkse MW, Lemeer S, Benschop JJ, Heck AJ. Mohammed S, et al. Among authors: lemeer s. J Proteome Res. 2008 Apr;7(4):1565-71. doi: 10.1021/pr700635a. Epub 2008 Feb 29. J Proteome Res. 2008. PMID: 18307298
Quantitative chemical proteomics reveals new potential drug targets in head and neck cancer.
Wu Z, Doondeea JB, Gholami AM, Janning MC, Lemeer S, Kramer K, Eccles SA, Gollin SM, Grenman R, Walch A, Feller SM, Kuster B. Wu Z, et al. Among authors: lemeer s. Mol Cell Proteomics. 2011 Dec;10(12):M111.011635. doi: 10.1074/mcp.M111.011635. Epub 2011 Sep 28. Mol Cell Proteomics. 2011. PMID: 21955398 Free PMC article.
Phosphotyrosine mediated protein interactions of the discoidin domain receptor 1.
Lemeer S, Bluwstein A, Wu Z, Leberfinger J, Müller K, Kramer K, Kuster B. Lemeer S, et al. J Proteomics. 2012 Jun 27;75(12):3465-77. doi: 10.1016/j.jprot.2011.10.007. Epub 2011 Oct 26. J Proteomics. 2012. PMID: 22057045
MScDB: a mass spectrometry-centric protein sequence database for proteomics.
Marx H, Lemeer S, Klaeger S, Rattei T, Kuster B. Marx H, et al. Among authors: lemeer s. J Proteome Res. 2013 Jun 7;12(6):2386-98. doi: 10.1021/pr400215r. Epub 2013 May 14. J Proteome Res. 2013. PMID: 23627461
A large synthetic peptide and phosphopeptide reference library for mass spectrometry-based proteomics.
Marx H, Lemeer S, Schliep JE, Matheron L, Mohammed S, Cox J, Mann M, Heck AJ, Kuster B. Marx H, et al. Among authors: lemeer s. Nat Biotechnol. 2013 Jun;31(6):557-64. doi: 10.1038/nbt.2585. Epub 2013 May 19. Nat Biotechnol. 2013. PMID: 23685481
Characterization of a high field Orbitrap mass spectrometer for proteome analysis.
Pachl F, Ruprecht B, Lemeer S, Kuster B. Pachl F, et al. Among authors: lemeer s. Proteomics. 2013 Sep;13(17):2552-62. doi: 10.1002/pmic.201300076. Epub 2013 Jul 30. Proteomics. 2013. PMID: 23836775
DMSO enhances electrospray response, boosting sensitivity of proteomic experiments.
Hahne H, Pachl F, Ruprecht B, Maier SK, Klaeger S, Helm D, Médard G, Wilm M, Lemeer S, Kuster B. Hahne H, et al. Among authors: lemeer s. Nat Methods. 2013 Oct;10(10):989-91. doi: 10.1038/nmeth.2610. Epub 2013 Aug 25. Nat Methods. 2013. PMID: 23975139
Proteomic analysis of phosphorylation in cancer.
Ruprecht B, Lemeer S. Ruprecht B, et al. Among authors: lemeer s. Expert Rev Proteomics. 2014 Jun;11(3):259-67. doi: 10.1586/14789450.2014.901156. Epub 2014 Mar 26. Expert Rev Proteomics. 2014. PMID: 24666026 Review.
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