Lemmens K - Search Results

1

The condition-dependent transcriptional network in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, Monsieurs P, De Moor B, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Ann N Y Acad Sci. 2009 Mar;1158:29-35. doi: 10.1111/j.1749-6632.2008.03746.x. Ann N Y Acad Sci. 2009. PMID: 19348629

2

Inferring transcriptional modules from ChIP-chip, motif and microarray data.

Lemmens K, Dhollander T, De Bie T, Monsieurs P, Engelen K, Smets B, Winderickx J, De Moor B, Marchal K. Lemmens K, et al. Genome Biol. 2006;7(5):R37. doi: 10.1186/gb-2006-7-5-r37. Epub 2006 May 5. Genome Biol. 2006. PMID: 16677396 Free PMC article.

3

Query-driven module discovery in microarray data.

Dhollander T, Sheng Q, Lemmens K, De Moor B, Marchal K, Moreau Y. Dhollander T, et al. Among authors: lemmens k. Bioinformatics. 2007 Oct 1;23(19):2573-80. doi: 10.1093/bioinformatics/btm387. Epub 2007 Aug 8. Bioinformatics. 2007. PMID: 17686800

4

DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, De Keersmaecker SC, Thijs IM, Schoofs G, De Weerdt A, De Moor B, Vanderleyden J, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Genome Biol. 2009;10(3):R27. doi: 10.1186/gb-2009-10-3-r27. Epub 2009 Mar 6. Genome Biol. 2009. PMID: 19265557 Free PMC article.

5

ViTraM: visualization of transcriptional modules.

Sun H, Lemmens K, Van den Bulcke T, Engelen K, De Moor B, Marchal K. Sun H, et al. Among authors: lemmens k. Bioinformatics. 2009 Sep 15;25(18):2450-1. doi: 10.1093/bioinformatics/btp400. Epub 2009 Jul 8. Bioinformatics. 2009. PMID: 19587224

6

Inferring the transcriptional network of Bacillus subtilis.

Fadda A, Fierro AC, Lemmens K, Monsieurs P, Engelen K, Marchal K. Fadda A, et al. Among authors: lemmens k. Mol Biosyst. 2009 Dec;5(12):1840-52. doi: 10.1039/b907310h. Epub 2009 Jul 28. Mol Biosyst. 2009. PMID: 20023724

7

ModuleDigger: an itemset mining framework for the detection of cis-regulatory modules.

Sun H, De Bie T, Storms V, Fu Q, Dhollander T, Lemmens K, Verstuyf A, De Moor B, Marchal K. Sun H, et al. Among authors: lemmens k. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S30. doi: 10.1186/1471-2105-10-S1-S30. BMC Bioinformatics. 2009. PMID: 19208131 Free PMC article.

8

COLOMBOS: access port for cross-platform bacterial expression compendia.

Engelen K, Fu Q, Meysman P, Sánchez-Rodríguez A, De Smet R, Lemmens K, Fierro AC, Marchal K. Engelen K, et al. Among authors: lemmens k. PLoS One. 2011;6(7):e20938. doi: 10.1371/journal.pone.0020938. Epub 2011 Jul 14. PLoS One. 2011. PMID: 21779320 Free PMC article.

9

Directed module detection in a large-scale expression compendium.

Fu Q, Lemmens K, Sanchez-Rodriguez A, Thijs IM, Meysman P, Sun H, Fierro AC, Engelen K, Marchal K. Fu Q, et al. Among authors: lemmens k. Methods Mol Biol. 2012;804:131-65. doi: 10.1007/978-1-61779-361-5_8. Methods Mol Biol. 2012. PMID: 22144152

10

In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection.

Marchal K, De Keersmaecker S, Monsieurs P, van Boxel N, Lemmens K, Thijs G, Vanderleyden J, De Moor B. Marchal K, et al. Among authors: lemmens k. Genome Biol. 2004;5(2):R9. doi: 10.1186/gb-2004-5-2-r9. Epub 2004 Jan 29. Genome Biol. 2004. PMID: 14759259 Free PMC article.

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