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Recent improvements to the SMART domain-based sequence annotation resource.
Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, Mott R, Ciccarelli F, Copley RR, Ponting CP, Bork P. Letunic I, et al. Nucleic Acids Res. 2002 Jan 1;30(1):242-4. doi: 10.1093/nar/30.1.242. Nucleic Acids Res. 2002. PMID: 11752305 Free PMC article.
Genome and protein evolution in eukaryotes.
Copley RR, Letunic I, Bork P. Copley RR, et al. Among authors: letunic i. Curr Opin Chem Biol. 2002 Feb;6(1):39-45. doi: 10.1016/s1367-5931(01)00278-2. Curr Opin Chem Biol. 2002. PMID: 11827821 Review.
Protein domain analysis in the era of complete genomes.
Copley RR, Doerks T, Letunic I, Bork P. Copley RR, et al. Among authors: letunic i. FEBS Lett. 2002 Feb 20;513(1):129-34. doi: 10.1016/s0014-5793(01)03289-6. FEBS Lett. 2002. PMID: 11911892 Review.
InterPro: an integrated documentation resource for protein families, domains and functional sites.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley R, Courcelle E, Durbin R, Falquet L, Fleischmann W, Gouzy J, Griffith-Jones S, Haft D, Hermjakob H, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Orchard S, Pagni M, Peyruc D, Ponting CP, Servant F, Sigrist CJ; InterPro Consortium. Mulder NJ, et al. Among authors: letunic i. Brief Bioinform. 2002 Sep;3(3):225-35. doi: 10.1093/bib/3.3.225. Brief Bioinform. 2002. PMID: 12230031
Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster.
Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM, Mueller HM, Dimopoulos G, Law JH, Wells MA, Birney E, Charlab R, Halpern AL, Kokoza E, Kraft CL, Lai Z, Lewis S, Louis C, Barillas-Mury C, Nusskern D, Rubin GM, Salzberg SL, Sutton GG, Topalis P, Wides R, Wincker P, Yandell M, Collins FH, Ribeiro J, Gelbart WM, Kafatos FC, Bork P. Zdobnov EM, et al. Among authors: letunic i. Science. 2002 Oct 4;298(5591):149-59. doi: 10.1126/science.1077061. Science. 2002. PMID: 12364792
Alternative splicing and evolution.
Boue S, Letunic I, Bork P. Boue S, et al. Among authors: letunic i. Bioessays. 2003 Nov;25(11):1031-4. doi: 10.1002/bies.10371. Bioessays. 2003. PMID: 14579243 Review.
SMART 4.0: towards genomic data integration.
Letunic I, Copley RR, Schmidt S, Ciccarelli FD, Doerks T, Schultz J, Ponting CP, Bork P. Letunic I, et al. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4. doi: 10.1093/nar/gkh088. Nucleic Acids Res. 2004. PMID: 14681379 Free PMC article.
Consistency of genome-based methods in measuring Metazoan evolution.
Zdobnov EM, von Mering C, Letunic I, Bork P. Zdobnov EM, et al. Among authors: letunic i. FEBS Lett. 2005 Jun 13;579(15):3355-61. doi: 10.1016/j.febslet.2005.04.006. Epub 2005 Apr 18. FEBS Lett. 2005. PMID: 15943981 Review.
SMART 5: domains in the context of genomes and networks.
Letunic I, Copley RR, Pils B, Pinkert S, Schultz J, Bork P. Letunic I, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D257-60. doi: 10.1093/nar/gkj079. Nucleic Acids Res. 2006. PMID: 16381859 Free PMC article.
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