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19 results
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Using entropy maximization to understand the determinants of structural dynamics beyond native contact topology.
Lezon TR, Bahar I. Lezon TR, et al. PLoS Comput Biol. 2010 Jun 17;6(6):e1000816. doi: 10.1371/journal.pcbi.1000816. PLoS Comput Biol. 2010. PMID: 20585542 Free PMC article.
Using the principle of entropy maximization to infer genetic interaction networks from gene expression patterns.
Lezon TR, Banavar JR, Cieplak M, Maritan A, Fedoroff NV. Lezon TR, et al. Proc Natl Acad Sci U S A. 2006 Dec 12;103(50):19033-8. doi: 10.1073/pnas.0609152103. Epub 2006 Nov 30. Proc Natl Acad Sci U S A. 2006. PMID: 17138668 Free PMC article.
The effects of rigid motions on elastic network model force constants.
Lezon TR. Lezon TR. Proteins. 2012 Apr;80(4):1133-42. doi: 10.1002/prot.24014. Epub 2012 Jan 7. Proteins. 2012. PMID: 22228562 Free PMC article.
Global dynamics of proteins: bridging between structure and function.
Bahar I, Lezon TR, Yang LW, Eyal E. Bahar I, et al. Among authors: lezon tr. Annu Rev Biophys. 2010;39:23-42. doi: 10.1146/annurev.biophys.093008.131258. Annu Rev Biophys. 2010. PMID: 20192781 Free PMC article. Review.
Global motions of the nuclear pore complex: insights from elastic network models.
Lezon TR, Sali A, Bahar I. Lezon TR, et al. PLoS Comput Biol. 2009 Sep;5(9):e1000496. doi: 10.1371/journal.pcbi.1000496. Epub 2009 Sep 4. PLoS Comput Biol. 2009. PMID: 19730674 Free PMC article.
What determines the spectrum of protein native state structures?
Lezon TR, Banavar JR, Lesk AM, Maritan A. Lezon TR, et al. Proteins. 2006 May 1;63(2):273-7. doi: 10.1002/prot.20869. Proteins. 2006. PMID: 16470841
Normal mode analysis of biomolecular structures: functional mechanisms of membrane proteins.
Bahar I, Lezon TR, Bakan A, Shrivastava IH. Bahar I, et al. Among authors: lezon tr. Chem Rev. 2010 Mar 10;110(3):1463-97. doi: 10.1021/cr900095e. Chem Rev. 2010. PMID: 19785456 Free PMC article. Review. No abstract available.
Constraints imposed by the membrane selectively guide the alternating access dynamics of the glutamate transporter GltPh.
Lezon TR, Bahar I. Lezon TR, et al. Biophys J. 2012 Mar 21;102(6):1331-40. doi: 10.1016/j.bpj.2012.02.028. Epub 2012 Mar 20. Biophys J. 2012. PMID: 22455916 Free PMC article.
Evol and ProDy for bridging protein sequence evolution and structural dynamics.
Bakan A, Dutta A, Mao W, Liu Y, Chennubhotla C, Lezon TR, Bahar I. Bakan A, et al. Among authors: lezon tr. Bioinformatics. 2014 Sep 15;30(18):2681-3. doi: 10.1093/bioinformatics/btu336. Epub 2014 May 21. Bioinformatics. 2014. PMID: 24849577 Free PMC article.
Recognition of coarse-grained protein tertiary structure.
Lezon T, Banavar JR, Maritan A. Lezon T, et al. Proteins. 2004 May 15;55(3):536-47. doi: 10.1002/prot.20094. Proteins. 2004. PMID: 15103618
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