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A novel algorithm and web-based tool for comparing two alternative phylogenetic trees.
Nye TM, Liò P, Gilks WR. Nye TM, et al. Among authors: lio p. Bioinformatics. 2006 Jan 1;22(1):117-9. doi: 10.1093/bioinformatics/bti720. Epub 2005 Oct 18. Bioinformatics. 2006. PMID: 16234319
MeDuSa: a multi-draft based scaffolder.
Bosi E, Donati B, Galardini M, Brunetti S, Sagot MF, Lió P, Crescenzi P, Fani R, Fondi M. Bosi E, et al. Among authors: lio p. Bioinformatics. 2015 Aug 1;31(15):2443-51. doi: 10.1093/bioinformatics/btv171. Epub 2015 Mar 25. Bioinformatics. 2015. PMID: 25810435
Identification of DNA regulatory motifs using Bayesian variable selection.
Tadesse MG, Vannucci M, Liò P. Tadesse MG, et al. Among authors: lio p. Bioinformatics. 2004 Nov 1;20(16):2553-61. doi: 10.1093/bioinformatics/bth282. Epub 2004 Apr 29. Bioinformatics. 2004. PMID: 15117754
Forensic DNA and bioinformatics.
Bianchi L, Liò P. Bianchi L, et al. Among authors: lio p. Brief Bioinform. 2007 Mar;8(2):117-28. doi: 10.1093/bib/bbm006. Epub 2007 Mar 24. Brief Bioinform. 2007. PMID: 17384432 Review.
Dimensionality and dependence problems in statistical genomics.
Liò P. Liò P. Brief Bioinform. 2003 Jun;4(2):168-77. doi: 10.1093/bib/4.2.168. Brief Bioinform. 2003. PMID: 12846397
Wavelets in bioinformatics and computational biology: state of art and perspectives.
Liò P. Liò P. Bioinformatics. 2003 Jan;19(1):2-9. doi: 10.1093/bioinformatics/19.1.2. Bioinformatics. 2003. PMID: 12499286 Review.
Statistical bioinformatic methods in microbial genome analysis.
Liò P. Liò P. Bioessays. 2003 Mar;25(3):266-73. doi: 10.1002/bies.10231. Bioessays. 2003. PMID: 12596231 Review.
PASSML: combining evolutionary inference and protein secondary structure prediction.
Liò P, Goldman N, Thorne JL, Jones3 DT. Liò P, et al. Bioinformatics. 1998;14(8):726-33. doi: 10.1093/bioinformatics/14.8.726. Bioinformatics. 1998. PMID: 9789098
CONTACT: P.Lio@gen.cam.ac.uk...
CONTACT: P.Lio@gen.cam.ac.uk...
Wavelet change-point prediction of transmembrane proteins.
Lio P, Vannucci M. Lio P, et al. Bioinformatics. 2000 Apr;16(4):376-82. doi: 10.1093/bioinformatics/16.4.376. Bioinformatics. 2000. PMID: 10869036
Finding pathogenicity islands and gene transfer events in genome data.
Liò P, Vannucci M. Liò P, et al. Bioinformatics. 2000 Oct;16(10):932-40. doi: 10.1093/bioinformatics/16.10.932. Bioinformatics. 2000. PMID: 11120683
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