Li S - Search Results

1

Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data.

Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Barnes S, et al. Among authors: li s. J Mass Spectrom. 2016 Jul;51(7):461-75. doi: 10.1002/jms.3782. J Mass Spectrom. 2016. PMID: 27434804 Free PMC article.

2

Training in metabolomics research. II. Processing and statistical analysis of metabolomics data, metabolite identification, pathway analysis, applications of metabolomics and its future.

Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Barnes S, et al. Among authors: li s. J Mass Spectrom. 2016 Aug;51(8):535-548. doi: 10.1002/jms.3780. J Mass Spectrom. 2016. PMID: 28239968 Free PMC article.

3

One Step Forward for Reducing False Positive and False Negative Compound Identifications from Mass Spectrometry Metabolomics Data: New Algorithms for Constructing Extracted Ion Chromatograms and Detecting Chromatographic Peaks.

Myers OD, Sumner SJ, Li S, Barnes S, Du X. Myers OD, et al. Among authors: li s. Anal Chem. 2017 Sep 5;89(17):8696-8703. doi: 10.1021/acs.analchem.7b00947. Epub 2017 Aug 17. Anal Chem. 2017. PMID: 28752754

4

Detailed Investigation and Comparison of the XCMS and MZmine 2 Chromatogram Construction and Chromatographic Peak Detection Methods for Preprocessing Mass Spectrometry Metabolomics Data.

Myers OD, Sumner SJ, Li S, Barnes S, Du X. Myers OD, et al. Among authors: li s. Anal Chem. 2017 Sep 5;89(17):8689-8695. doi: 10.1021/acs.analchem.7b01069. Epub 2017 Aug 17. Anal Chem. 2017. PMID: 28752757

5

Cloud-based archived metabolomics data: A resource for in-source fragmentation/annotation, meta-analysis and systems biology.

Palermo A, Huan T, Rinehart D, Rinschen MM, Li S, O'Donnell VB, Fahy E, Xue J, Subramaniam S, Benton HP, Siuzdak G. Palermo A, et al. Among authors: li s. Anal Sci Adv. 2020 Jun;1(1):70-80. doi: 10.1002/ansa.202000042. Epub 2020 Jun 13. Anal Sci Adv. 2020. PMID: 35190800 Free PMC article.

6

A Practical Guide to Metabolomics Software Development.

Chang HY, Colby SM, Du X, Gomez JD, Helf MJ, Kechris K, Kirkpatrick CR, Li S, Patti GJ, Renslow RS, Subramaniam S, Verma M, Xia J, Young JD. Chang HY, et al. Among authors: li s. Anal Chem. 2021 Feb 2;93(4):1912-1923. doi: 10.1021/acs.analchem.0c03581. Epub 2021 Jan 19. Anal Chem. 2021. PMID: 33467846 Free PMC article.

7

Hybrid feature detection and information accumulation using high-resolution LC-MS metabolomics data.

Yu T, Park Y, Li S, Jones DP. Yu T, et al. Among authors: li s. J Proteome Res. 2013 Mar 1;12(3):1419-27. doi: 10.1021/pr301053d. Epub 2013 Feb 12. J Proteome Res. 2013. PMID: 23362826 Free PMC article.

8

Predicting network activity from high throughput metabolomics.

Li S, Park Y, Duraisingham S, Strobel FH, Khan N, Soltow QA, Jones DP, Pulendran B. Li S, et al. PLoS Comput Biol. 2013;9(7):e1003123. doi: 10.1371/journal.pcbi.1003123. Epub 2013 Jul 4. PLoS Comput Biol. 2013. PMID: 23861661 Free PMC article.

9

Pathway Analysis for Targeted and Untargeted Metabolomics.

Karnovsky A, Li S. Karnovsky A, et al. Among authors: li s. Methods Mol Biol. 2020;2104:387-400. doi: 10.1007/978-1-0716-0239-3_19. Methods Mol Biol. 2020. PMID: 31953827 Review.

10

Amino Acid Metabolism is Altered in Adolescents with Nonalcoholic Fatty Liver Disease-An Untargeted, High Resolution Metabolomics Study.

Jin R, Banton S, Tran VT, Konomi JV, Li S, Jones DP, Vos MB. Jin R, et al. Among authors: li s. J Pediatr. 2016 May;172:14-19.e5. doi: 10.1016/j.jpeds.2016.01.026. Epub 2016 Feb 5. J Pediatr. 2016. PMID: 26858195 Free PMC article.

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