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Genomic variation in 3,010 diverse accessions of Asian cultivated rice.
Wang W, Mauleon R, Hu Z, Chebotarov D, Tai S, Wu Z, Li M, Zheng T, Fuentes RR, Zhang F, Mansueto L, Copetti D, Sanciangco M, Palis KC, Xu J, Sun C, Fu B, Zhang H, Gao Y, Zhao X, Shen F, Cui X, Yu H, Li Z, Chen M, Detras J, Zhou Y, Zhang X, Zhao Y, Kudrna D, Wang C, Li R, Jia B, Lu J, He X, Dong Z, Xu J, Li Y, Wang M, Shi J, Li J, Zhang D, Lee S, Hu W, Poliakov A, Dubchak I, Ulat VJ, Borja FN, Mendoza JR, Ali J, Li J, Gao Q, Niu Y, Yue Z, Naredo MEB, Talag J, Wang X, Li J, Fang X, Yin Y, Glaszmann JC, Zhang J, Li J, Hamilton RS, Wing RA, Ruan J, Zhang G, Wei C, Alexandrov N, McNally KL, Li Z, Leung H. Wang W, et al. Among authors: li y, li z, li j, li m, li r. Nature. 2018 May;557(7703):43-49. doi: 10.1038/s41586-018-0063-9. Epub 2018 Apr 25. Nature. 2018. PMID: 29695866 Free PMC article.
Whole-genome sequencing reveals untapped genetic potential in Africa's indigenous cereal crop sorghum.
Mace ES, Tai S, Gilding EK, Li Y, Prentis PJ, Bian L, Campbell BC, Hu W, Innes DJ, Han X, Cruickshank A, Dai C, Frère C, Zhang H, Hunt CH, Wang X, Shatte T, Wang M, Su Z, Li J, Lin X, Godwin ID, Jordan DR, Wang J. Mace ES, et al. Among authors: li y, li j. Nat Commun. 2013;4:2320. doi: 10.1038/ncomms3320. Nat Commun. 2013. PMID: 23982223 Free PMC article.
Diversification and independent domestication of Asian and European pears.
Wu J, Wang Y, Xu J, Korban SS, Fei Z, Tao S, Ming R, Tai S, Khan AM, Postman JD, Gu C, Yin H, Zheng D, Qi K, Li Y, Wang R, Deng CH, Kumar S, Chagné D, Li X, Wu J, Huang X, Zhang H, Xie Z, Li X, Zhang M, Li Y, Yue Z, Fang X, Li J, Li L, Jin C, Qin M, Zhang J, Wu X, Ke Y, Wang J, Yang H, Zhang S. Wu J, et al. Among authors: li y, li j, li x, li l. Genome Biol. 2018 Jun 11;19(1):77. doi: 10.1186/s13059-018-1452-y. Genome Biol. 2018. PMID: 29890997 Free PMC article.
Selective and comparative genome architecture of Asian cultivated rice (Oryza sativa L.) attributed to domestication and modern breeding.
Wang X, Wang W, Tai S, Li M, Gao Q, Hu Z, Hu W, Wu Z, Zhu X, Xie J, Li F, Zhang Z, Zhi L, Zhang F, Ma X, Yang M, Xu J, Li Y, Zhang W, Yang X, Chen Y, Zhao Y, Fu B, Zhao X, Li J, Wang M, Yue Z, Fang X, Zeng W, Yin Y, Zhang G, Xu J, Zhang H, Li Z, Li Z. Wang X, et al. Among authors: li f, li y, li j, li z, li m. J Adv Res. 2022 Dec;42:1-16. doi: 10.1016/j.jare.2022.08.004. Epub 2022 Aug 18. J Adv Res. 2022. PMID: 35988902 Free PMC article.
High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation.
Tong X, Han MJ, Lu K, Tai S, Liang S, Liu Y, Hu H, Shen J, Long A, Zhan C, Ding X, Liu S, Gao Q, Zhang B, Zhou L, Tan D, Yuan Y, Guo N, Li YH, Wu Z, Liu L, Li C, Lu Y, Gai T, Zhang Y, Yang R, Qian H, Liu Y, Luo J, Zheng L, Lou J, Peng Y, Zuo W, Song J, He S, Wu S, Zou Y, Zhou L, Cheng L, Tang Y, Cheng G, Yuan L, He W, Xu J, Fu T, Xiao Y, Lei T, Xu A, Yin Y, Wang J, Monteiro A, Westhof E, Lu C, Tian Z, Wang W, Xiang Z, Dai F. Tong X, et al. Among authors: li yh, li c. Nat Commun. 2022 Sep 24;13(1):5619. doi: 10.1038/s41467-022-33366-x. Nat Commun. 2022. PMID: 36153338 Free PMC article.
Mechanisms of sex differentiation and sex reversal in hermaphrodite fish as revealed by the Epinephelus coioides genome.
Li S, Li W, Jiang S, Jing Y, Xiao L, Yu Y, Liu Y, Li Y, Wang D, Li J, Peng C, Chen J, Lu D, Wu B, Guang X, Ma J, You X, Yang Y, Liu S, Fang X, Gao Q, Shi Q, Lin H, Schartl M, Yue Z, Zhang Y. Li S, et al. Among authors: li y, li j, li w. Mol Ecol Resour. 2023 May;23(4):920-932. doi: 10.1111/1755-0998.13753. Epub 2023 Jan 19. Mol Ecol Resour. 2023. PMID: 36631404
Obligate mutualism within a host drives the extreme specialization of a fig wasp genome.
Xiao JH, Yue Z, Jia LY, Yang XH, Niu LH, Wang Z, Zhang P, Sun BF, He SM, Li Z, Xiong TL, Xin W, Gu HF, Wang B, Werren JH, Murphy RW, Wheeler D, Niu LM, Ma GC, Tang T, Bian SN, Wang NX, Yang CY, Wang N, Fu YG, Li WZ, Yi SV, Yang XY, Zhou Q, Lu CX, Xu CY, He LJ, Yu LL, Chen M, Zheng Y, Wang SW, Zhao S, Li YH, Yu YY, Qian XJ, Cai Y, Bian LL, Zhang S, Wang JY, Yin Y, Xiao H, Wang GH, Yu H, Wu WS, Cook JM, Wang J, Huang DW. Xiao JH, et al. Among authors: li yh, li wz, li z. Genome Biol. 2013 Dec 20;14(12):R141. doi: 10.1186/gb-2013-14-12-r141. Genome Biol. 2013. PMID: 24359812 Free PMC article.
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