Metabolic characterization and genes for the conversion of biphenyl in Dyella ginsengisoli LA-4

Biotechnol Bioeng. 2012 Feb;109(2):609-13. doi: 10.1002/bit.23333. Epub 2011 Sep 28.

Abstract

A complete bph gene cluster (bphLA-4) containing 12,186 bp was amplified from Dyella ginsengisoli LA-4. The bphLA-4 was composed of bphABCXD, and an additional gene encoding a meta-fission product hydrolase was located in the bphX region. BphLA-4 was independently transcribed by the two operons, bphA1A2orf1A3A4BCX0 and bphX1orf2X2X3D, and significantly differed from bphKF707. Both benzoate and catechol induced the expression of both operons. 2-Hydroxypenta-2,4-dienoate was identified as the intermediate of the biphenyl degradation by strain LA-4. This finding suggested that there existed a novel lower pathway of biphenyl degradation in strain LA-4.

Publication types

  • Letter
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Benzoates / metabolism
  • Biphenyl Compounds / chemistry
  • Biphenyl Compounds / metabolism*
  • Catechols / metabolism
  • Environmental Pollutants / chemistry
  • Environmental Pollutants / metabolism
  • Genes, Bacterial*
  • Molecular Sequence Data
  • Multigene Family
  • Xanthomonadaceae / chemistry
  • Xanthomonadaceae / genetics*
  • Xanthomonadaceae / metabolism*

Substances

  • Benzoates
  • Biphenyl Compounds
  • Catechols
  • Environmental Pollutants
  • diphenyl
  • catechol