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The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.
Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Kim KD, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P. Bertioli DJ, et al. Among authors: liu x. Nat Genet. 2016 Apr;48(4):438-46. doi: 10.1038/ng.3517. Epub 2016 Feb 22. Nat Genet. 2016. PMID: 26901068 Free article.
Landscape of genomic diversity and trait discovery in soybean.
Valliyodan B, Dan Qiu, Patil G, Zeng P, Huang J, Dai L, Chen C, Li Y, Joshi T, Song L, Vuong TD, Musket TA, Xu D, Shannon JG, Shifeng C, Liu X, Nguyen HT. Valliyodan B, et al. Among authors: liu x. Sci Rep. 2016 Mar 31;6:23598. doi: 10.1038/srep23598. Sci Rep. 2016. PMID: 27029319 Free PMC article.
Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.).
Thudi M, Chitikineni A, Liu X, He W, Roorkiwal M, Yang W, Jian J, Doddamani D, Gaur PM, Rathore A, Samineni S, Saxena RK, Xu D, Singh NP, Chaturvedi SK, Zhang G, Wang J, Datta SK, Xu X, Varshney RK. Thudi M, et al. Among authors: liu x. Sci Rep. 2016 Dec 16;6:38636. doi: 10.1038/srep38636. Sci Rep. 2016. PMID: 27982107 Free PMC article.
Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments.
Varshney RK, Shi C, Thudi M, Mariac C, Wallace J, Qi P, Zhang H, Zhao Y, Wang X, Rathore A, Srivastava RK, Chitikineni A, Fan G, Bajaj P, Punnuri S, Gupta SK, Wang H, Jiang Y, Couderc M, Katta MAVSK, Paudel DR, Mungra KD, Chen W, Harris-Shultz KR, Garg V, Desai N, Doddamani D, Kane NA, Conner JA, Ghatak A, Chaturvedi P, Subramaniam S, Yadav OP, Berthouly-Salazar C, Hamidou F, Wang J, Liang X, Clotault J, Upadhyaya HD, Cubry P, Rhoné B, Gueye MC, Sunkar R, Dupuy C, Sparvoli F, Cheng S, Mahala RS, Singh B, Yadav RS, Lyons E, Datta SK, Hash CT, Devos KM, Buckler E, Bennetzen JL, Paterson AH, Ozias-Akins P, Grando S, Wang J, Mohapatra T, Weckwerth W, Reif JC, Liu X, Vigouroux Y, Xu X. Varshney RK, et al. Among authors: liu x. Nat Biotechnol. 2017 Oct;35(10):969-976. doi: 10.1038/nbt.3943. Epub 2017 Sep 18. Nat Biotechnol. 2017. PMID: 28922347 Free PMC article.
High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut.
Agarwal G, Clevenger J, Pandey MK, Wang H, Shasidhar Y, Chu Y, Fountain JC, Choudhary D, Culbreath AK, Liu X, Huang G, Wang X, Deshmukh R, Holbrook CC, Bertioli DJ, Ozias-Akins P, Jackson SA, Varshney RK, Guo B. Agarwal G, et al. Among authors: liu x. Plant Biotechnol J. 2018 Nov;16(11):1954-1967. doi: 10.1111/pbi.12930. Epub 2018 May 15. Plant Biotechnol J. 2018. PMID: 29637729 Free PMC article.
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