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A computational screen for methylation guide snoRNAs in yeast.
Lowe TM, Eddy SR. Lowe TM, et al. Science. 1999 Feb 19;283(5405):1168-71. doi: 10.1126/science.283.5405.1168. Science. 1999. PMID: 10024243
Methylation guide RNA evolution in archaea: structure, function and genomic organization of 110 C/D box sRNA families across six Pyrobaculum species.
Lui LM, Uzilov AV, Bernick DL, Corredor A, Lowe TM, Dennis PP. Lui LM, et al. Among authors: lowe tm. Nucleic Acids Res. 2018 Jun 20;46(11):5678-5691. doi: 10.1093/nar/gky284. Nucleic Acids Res. 2018. PMID: 29771354 Free PMC article.
GtRNAdb: a database of transfer RNA genes detected in genomic sequence.
Chan PP, Lowe TM. Chan PP, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D93-7. doi: 10.1093/nar/gkn787. Epub 2008 Nov 4. Nucleic Acids Res. 2009. PMID: 18984615 Free PMC article.
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.
Schattner P, Brooks AN, Lowe TM. Schattner P, et al. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366. Nucleic Acids Res. 2005. PMID: 15980563 Free PMC article.
Plant snoRNA database.
Brown JW, Echeverria M, Qu LH, Lowe TM, Bachellerie JP, Hüttenhofer A, Kastenmayer JP, Green PJ, Shaw P, Marshall DF. Brown JW, et al. Nucleic Acids Res. 2003 Jan 1;31(1):432-5. doi: 10.1093/nar/gkg009. Nucleic Acids Res. 2003. PMID: 12520043 Free PMC article.
Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome.
Schattner P, Decatur WA, Davis CA, Ares M Jr, Fournier MJ, Lowe TM. Schattner P, et al. Nucleic Acids Res. 2004 Aug 11;32(14):4281-96. doi: 10.1093/nar/gkh768. Print 2004. Nucleic Acids Res. 2004. PMID: 15306656 Free PMC article.
Matching tRNA modifications in humans to their known and predicted enzymes.
de Crécy-Lagard V, Boccaletto P, Mangleburg CG, Sharma P, Lowe TM, Leidel SA, Bujnicki JM. de Crécy-Lagard V, et al. Among authors: lowe tm. Nucleic Acids Res. 2019 Mar 18;47(5):2143-2159. doi: 10.1093/nar/gkz011. Nucleic Acids Res. 2019. PMID: 30698754 Free PMC article.
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