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GeneMark.hmm: new solutions for gene finding.
Lukashin AV, Borodovsky M. Lukashin AV, et al. Nucleic Acids Res. 1998 Feb 15;26(4):1107-15. doi: 10.1093/nar/26.4.1107. Nucleic Acids Res. 1998. PMID: 9461475 Free PMC article.
Multiple alignment using simulated annealing: branch point definition in human mRNA splicing.
Lukashin AV, Engelbrecht J, Brunak S. Lukashin AV, et al. Nucleic Acids Res. 1992 May 25;20(10):2511-6. doi: 10.1093/nar/20.10.2511. Nucleic Acids Res. 1992. PMID: 1598209 Free PMC article.
Fluctuations in superhelical DNA.
Vologodskii AV, Lukashin AV, Anshelevich VV, Frank-Kamenetskii MD. Vologodskii AV, et al. Among authors: lukashin av. Nucleic Acids Res. 1979 Mar;6(3):967-82. doi: 10.1093/nar/6.3.967. Nucleic Acids Res. 1979. PMID: 155809 Free PMC article.
Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix.
Vologodskii AV, Anshelevich VV, Lukashin AV, Frank-Kamenetskii MD. Vologodskii AV, et al. Among authors: lukashin av. Nature. 1979 Jul 26;280(5720):294-8. doi: 10.1038/280294a0. Nature. 1979. PMID: 460401
Torsional and bending rigidity of the double helix from data on small DNA rings.
Frank-Kamenetskii MD, Lukashin AV, Anshelevich VV, Vologodskii AV. Frank-Kamenetskii MD, et al. Among authors: lukashin av. J Biomol Struct Dyn. 1985 Feb;2(5):1005-12. doi: 10.1080/07391102.1985.10507616. J Biomol Struct Dyn. 1985. PMID: 3916932
Statistical mechanics and topology of polymer chains.
Frank-Kamenetskii MD, Lukashin AV, Vologodskii AV. Frank-Kamenetskii MD, et al. Among authors: lukashin av. Nature. 1975 Dec 4;258(5534):398-402. doi: 10.1038/258398a0. Nature. 1975. PMID: 1196369
Letter: Comparison of different theoretical descriptions of helix-coli transition in DNA.
Lukashin AV, Vologodeskii AV, Frank-Kamenetskii MD. Lukashin AV, et al. Biopolymers. 1976 Sep;15(9):1841-4. doi: 10.1002/bip.1976.360150917. Biopolymers. 1976. PMID: 963263 No abstract available.
Statistical-mechanical treatment of violations of the double helix in supercoiled DNA.
Anshelevich VV, Vologodskii AV, Lukashin AV, Frank-Kamenetskii MD. Anshelevich VV, et al. Among authors: lukashin av. Biopolymers. 1979 Nov;18(11):2733-44. doi: 10.1002/bip.1979.360181107. Biopolymers. 1979. PMID: 159735 No abstract available.
Local multiple sequence alignment using dead-end elimination.
Lukashin AV, Rosa JJ. Lukashin AV, et al. Bioinformatics. 1999 Nov;15(11):947-53. doi: 10.1093/bioinformatics/15.11.947. Bioinformatics. 1999. PMID: 10743561
Application of polyelectrolyte theory to the study of the B-Z transition in DNA (1).
Frank-Kamenetskii MD, Lukashin AV, Anshelevich VV. Frank-Kamenetskii MD, et al. Among authors: lukashin av. J Biomol Struct Dyn. 1985 Aug;3(1):35-42. doi: 10.1080/07391102.1985.10508396. J Biomol Struct Dyn. 1985. PMID: 3917016
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