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11 results
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Methyl-CpG-binding domain proteins: readers of the epigenome.
Du Q, Luu PL, Stirzaker C, Clark SJ. Du Q, et al. Among authors: luu pl. Epigenomics. 2015;7(6):1051-73. doi: 10.2217/epi.15.39. Epub 2015 Apr 30. Epigenomics. 2015. PMID: 25927341 Free article. Review.
Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA.
Skvortsova K, Zotenko E, Luu PL, Gould CM, Nair SS, Clark SJ, Stirzaker C. Skvortsova K, et al. Among authors: luu pl. Epigenetics Chromatin. 2017 Apr 20;10:16. doi: 10.1186/s13072-017-0123-7. eCollection 2017. Epigenetics Chromatin. 2017. PMID: 28428825 Free PMC article.
Rules governing the mechanism of epigenetic reprogramming memory.
Luu PL, Gerovska D, Schöler HR, Araúzo-Bravo MJ. Luu PL, et al. Epigenomics. 2018 Feb;10(2):149-174. doi: 10.2217/epi-2017-0098. Epub 2018 Jan 16. Epigenomics. 2018. PMID: 29334780
Guidelines for whole genome bisulphite sequencing of intact and FFPET DNA on the Illumina HiSeq X Ten.
Nair SS, Luu PL, Qu W, Maddugoda M, Huschtscha L, Reddel R, Chenevix-Trench G, Toso M, Kench JG, Horvath LG, Hayes VM, Stricker PD, Hughes TP, White DL, Rasko JEJ, Wong JJ, Clark SJ. Nair SS, et al. Among authors: luu pl. Epigenetics Chromatin. 2018 May 28;11(1):24. doi: 10.1186/s13072-018-0194-0. Epigenetics Chromatin. 2018. PMID: 29807544 Free PMC article.
Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer.
Du Q, Bert SA, Armstrong NJ, Caldon CE, Song JZ, Nair SS, Gould CM, Luu PL, Peters T, Khoury A, Qu W, Zotenko E, Stirzaker C, Clark SJ. Du Q, et al. Among authors: luu pl. Nat Commun. 2019 Jan 24;10(1):416. doi: 10.1038/s41467-019-08302-1. Nat Commun. 2019. PMID: 30679435 Free PMC article.
DNA Hypermethylation Encroachment at CpG Island Borders in Cancer Is Predisposed by H3K4 Monomethylation Patterns.
Skvortsova K, Masle-Farquhar E, Luu PL, Song JZ, Qu W, Zotenko E, Gould CM, Du Q, Peters TJ, Colino-Sanguino Y, Pidsley R, Nair SS, Khoury A, Smith GC, Miosge LA, Reed JH, Kench JG, Rubin MA, Horvath L, Bogdanovic O, Lim SM, Polo JM, Goodnow CC, Stirzaker C, Clark SJ. Skvortsova K, et al. Among authors: luu pl. Cancer Cell. 2019 Feb 11;35(2):297-314.e8. doi: 10.1016/j.ccell.2019.01.004. Cancer Cell. 2019. PMID: 30753827 Free article.
Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
Khoury A, Achinger-Kawecka J, Bert SA, Smith GC, French HJ, Luu PL, Peters TJ, Du Q, Parry AJ, Valdes-Mora F, Taberlay PC, Stirzaker C, Statham AL, Clark SJ. Khoury A, et al. Among authors: luu pl. Nat Commun. 2020 Jan 7;11(1):54. doi: 10.1038/s41467-019-13753-7. Nat Commun. 2020. PMID: 31911579 Free PMC article.
Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine-resistant breast cancer.
Achinger-Kawecka J, Valdes-Mora F, Luu PL, Giles KA, Caldon CE, Qu W, Nair S, Soto S, Locke WJ, Yeo-Teh NS, Gould CM, Du Q, Smith GC, Ramos IR, Fernandez KF, Hoon DS, Gee JMW, Stirzaker C, Clark SJ. Achinger-Kawecka J, et al. Among authors: luu pl. Nat Commun. 2020 Jan 16;11(1):320. doi: 10.1038/s41467-019-14098-x. Nat Commun. 2020. PMID: 31949157 Free PMC article.
Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels.
Lam D, Luu PL, Song JZ, Qu W, Risbridger GP, Lawrence MG, Lu J, Trau M, Korbie D, Clark SJ, Pidsley R, Stirzaker C. Lam D, et al. Among authors: luu pl. Clin Epigenetics. 2020 Jun 22;12(1):90. doi: 10.1186/s13148-020-00880-y. Clin Epigenetics. 2020. PMID: 32571390 Free PMC article.
Disclosing the crosstalk among DNA methylation, transcription factors, and histone marks in human pluripotent cells through discovery of DNA methylation motifs.
Luu PL, Schöler HR, Araúzo-Bravo MJ. Luu PL, et al. Genome Res. 2013 Dec;23(12):2013-29. doi: 10.1101/gr.155960.113. Epub 2013 Oct 22. Genome Res. 2013. PMID: 24149073 Free PMC article.
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