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Gamma Peptide Nucleic Acids: As Orthogonal Nucleic Acid Recognition Codes for Organizing Molecular Self-Assembly.
Sacui I, Hsieh WC, Manna A, Sahu B, Ly DH. Sacui I, et al. Among authors: ly dh. J Am Chem Soc. 2015 Jul 8;137(26):8603-10. doi: 10.1021/jacs.5b04566. Epub 2015 Jun 29. J Am Chem Soc. 2015. PMID: 26079820
High yield, large scale synthesis of thiolate-protected Ag7 clusters.
Wu Z, Lanni E, Chen W, Bier ME, Ly D, Jin R. Wu Z, et al. J Am Chem Soc. 2009 Nov 25;131(46):16672-4. doi: 10.1021/ja907627f. J Am Chem Soc. 2009. PMID: 19886625
Antitumor effects of EGFR antisense guanidine-based peptide nucleic acids in cancer models.
Thomas SM, Sahu B, Rapireddy S, Bahal R, Wheeler SE, Procopio EM, Kim J, Joyce SC, Contrucci S, Wang Y, Chiosea SI, Lathrop KL, Watkins S, Grandis JR, Armitage BA, Ly DH. Thomas SM, et al. Among authors: ly dh. ACS Chem Biol. 2013 Feb 15;8(2):345-52. doi: 10.1021/cb3003946. Epub 2012 Nov 9. ACS Chem Biol. 2013. PMID: 23113581 Free PMC article.
High-affinity homologous peptide nucleic acid probes for targeting a quadruplex-forming sequence from a MYC promoter element.
Roy S, Tanious FA, Wilson WD, Ly DH, Armitage BA. Roy S, et al. Among authors: ly dh. Biochemistry. 2007 Sep 18;46(37):10433-43. doi: 10.1021/bi700854r. Epub 2007 Aug 24. Biochemistry. 2007. PMID: 17718513
RNA-Templated Concatenation of Triplet Nucleic-Acid Probe.
Bahal R, Manna A, Hsieh WC, Thadke SA, Sureshkumar G, Ly DH. Bahal R, et al. Among authors: ly dh. Chembiochem. 2018 Apr 4;19(7):674-678. doi: 10.1002/cbic.201700574. Epub 2018 Feb 12. Chembiochem. 2018. PMID: 29323790
Design of a "Mini" Nucleic Acid Probe for Cooperative Binding of an RNA-Repeated Transcript Associated with Myotonic Dystrophy Type 1.
Hsieh WC, Bahal R, Thadke SA, Bhatt K, Sobczak K, Thornton C, Ly DH. Hsieh WC, et al. Among authors: ly dh. Biochemistry. 2018 Feb 13;57(6):907-911. doi: 10.1021/acs.biochem.7b01239. Epub 2018 Jan 19. Biochemistry. 2018. PMID: 29334465 Free PMC article.
Design of Bivalent Nucleic Acid Ligands for Recognition of RNA-Repeated Expansion Associated with Huntington's Disease.
Thadke SA, Perera JDR, Hridya VM, Bhatt K, Shaikh AY, Hsieh WC, Chen M, Gayathri C, Gil RR, Rule GS, Mukherjee A, Thornton CA, Ly DH. Thadke SA, et al. Among authors: ly dh. Biochemistry. 2018 Apr 10;57(14):2094-2108. doi: 10.1021/acs.biochem.8b00062. Epub 2018 Mar 27. Biochemistry. 2018. PMID: 29562132 Free PMC article.
Strand invasion of DNA quadruplexes by PNA: comparison of homologous and complementary hybridization.
Gupta A, Lee LL, Roy S, Tanious FA, Wilson WD, Ly DH, Armitage BA. Gupta A, et al. Among authors: ly dh. Chembiochem. 2013 Aug 19;14(12):1476-84. doi: 10.1002/cbic.201300263. Epub 2013 Jul 19. Chembiochem. 2013. PMID: 23868291 Free PMC article.
High affinity ╬│PNA sandwich hybridization assay for rapid detection of short nucleic acid targets with single mismatch discrimination.
Goldman JM, Zhang LA, Manna A, Armitage BA, Ly DH, Schneider JW. Goldman JM, et al. Among authors: ly dh. Biomacromolecules. 2013 Jul 8;14(7):2253-61. doi: 10.1021/bm400388a. Epub 2013 Jun 18. Biomacromolecules. 2013. PMID: 23777445
Effect of backbone flexibility on charge transfer rates in peptide nucleic acid duplexes.
Wierzbinski E, de Leon A, Yin X, Balaeff A, Davis KL, Rapireddy S, Venkatramani R, Keinan S, Ly DH, Madrid M, Beratan DN, Achim C, Waldeck DH. Wierzbinski E, et al. Among authors: ly dh. J Am Chem Soc. 2012 Jun 6;134(22):9335-42. doi: 10.1021/ja301677z. Epub 2012 May 21. J Am Chem Soc. 2012. PMID: 22548314
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