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Reexamining the polyadenylation signal: were we wrong about AAUAAA?
MacDonald CC, Redondo JL. MacDonald CC, et al. Mol Cell Endocrinol. 2002 Apr 25;190(1-2):1-8. doi: 10.1016/s0303-7207(02)00044-8. Mol Cell Endocrinol. 2002. PMID: 11997173 Review.
Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis.
Liu D, Brockman JM, Dass B, Hutchins LN, Singh P, McCarrey JR, MacDonald CC, Graber JH. Liu D, et al. Among authors: macdonald cc. Nucleic Acids Res. 2007;35(1):234-46. doi: 10.1093/nar/gkl919. Epub 2006 Dec 8. Nucleic Acids Res. 2007. PMID: 17158511 Free PMC article.
Polyadenylation site-specific differences in the activity of the neuronal ╬▓CstF-64 protein in PC-12 cells.
Shankarling GS, MacDonald CC. Shankarling GS, et al. Among authors: macdonald cc. Gene. 2013 Oct 25;529(2):220-7. doi: 10.1016/j.gene.2013.08.007. Epub 2013 Aug 12. Gene. 2013. PMID: 23948079 Free PMC article.
Alternative mRNA polyadenylation can potentially affect detection of gene expression by affymetrix genechip arrays.
D'mello V, Lee JY, MacDonald CC, Tian B. D'mello V, et al. Among authors: macdonald cc. Appl Bioinformatics. 2006;5(4):249-53. doi: 10.2165/00822942-200605040-00007. Appl Bioinformatics. 2006. PMID: 17140271
Loss of polyadenylation protein tauCstF-64 causes spermatogenic defects and male infertility.
Dass B, Tardif S, Park JY, Tian B, Weitlauf HM, Hess RA, Carnes K, Griswold MD, Small CL, Macdonald CC. Dass B, et al. Among authors: macdonald cc. Proc Natl Acad Sci U S A. 2007 Dec 18;104(51):20374-9. doi: 10.1073/pnas.0707589104. Epub 2007 Dec 12. Proc Natl Acad Sci U S A. 2007. PMID: 18077340 Free PMC article.
The stem-loop luciferase assay for polyadenylation (SLAP) method for determining CstF-64-dependent polyadenylation activity.
Hockert JA, Macdonald CC. Hockert JA, et al. Among authors: macdonald cc. Methods Mol Biol. 2014;1125:109-17. doi: 10.1007/978-1-62703-971-0_9. Methods Mol Biol. 2014. PMID: 24590783 Free PMC article.
High-throughput sequencing of RNA isolated by cross-linking and immunoprecipitation (HITS-CLIP) to determine sites of binding of CstF-64 on nascent RNAs.
Grozdanov PN, Macdonald CC. Grozdanov PN, et al. Among authors: macdonald cc. Methods Mol Biol. 2014;1125:187-208. doi: 10.1007/978-1-62703-971-0_17. Methods Mol Biol. 2014. PMID: 24590791 Free PMC article.
The structural basis of CstF-77 modulation of cleavage and polyadenylation through stimulation of CstF-64 activity.
Grozdanov PN, Masoumzadeh E, Latham MP, MacDonald CC. Grozdanov PN, et al. Among authors: macdonald cc. Nucleic Acids Res. 2018 Dec 14;46(22):12022-12039. doi: 10.1093/nar/gky862. Nucleic Acids Res. 2018. PMID: 30257008 Free PMC article.
TauCstF-64 Mediates Correct mRNA Polyadenylation and Splicing of Activator and Repressor Isoforms of the Cyclic AMP-Responsive Element Modulator (CREM) in Mouse Testis.
Grozdanov PN, Amatullah A, Graber JH, MacDonald CC. Grozdanov PN, et al. Among authors: macdonald cc. Biol Reprod. 2016 Feb;94(2):34. doi: 10.1095/biolreprod.115.134684. Epub 2015 Dec 23. Biol Reprod. 2016. PMID: 26700942 Free PMC article.
CstF-64 supports pluripotency and regulates cell cycle progression in embryonic stem cells through histone 3' end processing.
Youngblood BA, Grozdanov PN, MacDonald CC. Youngblood BA, et al. Among authors: macdonald cc. Nucleic Acids Res. 2014 Jul;42(13):8330-42. doi: 10.1093/nar/gku551. Epub 2014 Jun 23. Nucleic Acids Res. 2014. PMID: 24957598 Free PMC article.
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