Makabe K - Search Results

1

Minimalist design of water-soluble cross-beta architecture.

Biancalana M, Makabe K, Koide S. Biancalana M, et al. Among authors: makabe k. Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3469-74. doi: 10.1073/pnas.0912654107. Epub 2010 Feb 4. Proc Natl Acad Sci U S A. 2010. PMID: 20133689 Free PMC article.

2

Aromatic cluster mutations produce focal modulations of β-sheet structure.

Biancalana M, Makabe K, Yan S, Koide S. Biancalana M, et al. Among authors: makabe k. Protein Sci. 2015 May;24(5):841-9. doi: 10.1002/pro.2657. Epub 2015 Mar 25. Protein Sci. 2015. PMID: 25645104 Free PMC article.

3

Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.

Huang J, Makabe K, Biancalana M, Koide A, Koide S. Huang J, et al. Among authors: makabe k. J Mol Biol. 2009 Oct 9;392(5):1221-31. doi: 10.1016/j.jmb.2009.07.067. Epub 2009 Jul 30. J Mol Biol. 2009. PMID: 19646997 Free PMC article.

4

Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies.

Biancalana M, Makabe K, Koide A, Koide S. Biancalana M, et al. Among authors: makabe k. J Mol Biol. 2009 Jan 30;385(4):1052-63. doi: 10.1016/j.jmb.2008.11.006. Epub 2008 Nov 14. J Mol Biol. 2009. PMID: 19038267 Free PMC article.

5

The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion.

Makabe K, Koide S. Makabe K, et al. J Am Chem Soc. 2008 Nov 5;130(44):14370-1. doi: 10.1021/ja805011h. Epub 2008 Oct 9. J Am Chem Soc. 2008. PMID: 18842042

6

Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics.

Biancalana M, Makabe K, Koide A, Koide S. Biancalana M, et al. Among authors: makabe k. J Mol Biol. 2008 Oct 31;383(1):205-13. doi: 10.1016/j.jmb.2008.08.031. Epub 2008 Aug 22. J Mol Biol. 2008. PMID: 18762191 Free PMC article.

7

Design of protein function leaps by directed domain interface evolution.

Huang J, Koide A, Makabe K, Koide S. Huang J, et al. Among authors: makabe k. Proc Natl Acad Sci U S A. 2008 May 6;105(18):6578-83. doi: 10.1073/pnas.0801097105. Epub 2008 Apr 29. Proc Natl Acad Sci U S A. 2008. PMID: 18445649 Free PMC article.

8

High-resolution structure of a self-assembly-competent form of a hydrophobic peptide captured in a soluble beta-sheet scaffold.

Makabe K, Biancalana M, Yan S, Tereshko V, Gawlak G, Miller-Auer H, Meredith SC, Koide S. Makabe K, et al. J Mol Biol. 2008 Apr 25;378(2):459-67. doi: 10.1016/j.jmb.2008.02.051. Epub 2008 Mar 4. J Mol Biol. 2008. PMID: 18367205 Free PMC article.

9

Beta-strand flipping and slipping triggered by turn replacement reveal the opportunistic nature of beta-strand pairing.

Makabe K, Yan S, Tereshko V, Gawlak G, Koide S. Makabe K, et al. J Am Chem Soc. 2007 Nov 28;129(47):14661-9. doi: 10.1021/ja074252c. Epub 2007 Nov 7. J Am Chem Soc. 2007. PMID: 17985889 Free PMC article.

10

Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.

Yan S, Gawlak G, Makabe K, Tereshko V, Koide A, Koide S. Yan S, et al. Among authors: makabe k. J Mol Biol. 2007 Apr 20;368(1):230-43. doi: 10.1016/j.jmb.2007.02.003. Epub 2007 Feb 7. J Mol Biol. 2007. PMID: 17335845 Free PMC article.

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