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A global genetic interaction network maps a wiring diagram of cellular function.
Costanzo M, VanderSluis B, Koch EN, Baryshnikova A, Pons C, Tan G, Wang W, Usaj M, Hanchard J, Lee SD, Pelechano V, Styles EB, Billmann M, van Leeuwen J, van Dyk N, Lin ZY, Kuzmin E, Nelson J, Piotrowski JS, Srikumar T, Bahr S, Chen Y, Deshpande R, Kurat CF, Li SC, Li Z, Usaj MM, Okada H, Pascoe N, San Luis BJ, Sharifpoor S, Shuteriqi E, Simpkins SW, Snider J, Suresh HG, Tan Y, Zhu H, Malod-Dognin N, Janjic V, Przulj N, Troyanskaya OG, Stagljar I, Xia T, Ohya Y, Gingras AC, Raught B, Boutros M, Steinmetz LM, Moore CL, Rosebrock AP, Caudy AA, Myers CL, Andrews B, Boone C. Costanzo M, et al. Science. 2016 Sep 23;353(6306):aaf1420. doi: 10.1126/science.aaf1420. Science. 2016. PMID: 27708008 Free PMC article.
Revealing the hidden language of complex networks.
Yaveroğlu ÖN, Malod-Dognin N, Davis D, Levnajic Z, Janjic V, Karapandza R, Stojmirovic A, Pržulj N. Yaveroğlu ÖN, et al. Sci Rep. 2014 Apr 1;4:4547. doi: 10.1038/srep04547. Sci Rep. 2014. PMID: 24686408 Free PMC article.
L-GRAAL: Lagrangian graphlet-based network aligner.
Malod-Dognin N, Pržulj N. Malod-Dognin N, et al. Bioinformatics. 2015 Jul 1;31(13):2182-9. doi: 10.1093/bioinformatics/btv130. Epub 2015 Feb 28. Bioinformatics. 2015. PMID: 25725498 Free PMC article.
Fuse: multiple network alignment via data fusion.
Gligorijević V, Malod-Dognin N, Pržulj N. Gligorijević V, et al. Bioinformatics. 2016 Apr 15;32(8):1195-203. doi: 10.1093/bioinformatics/btv731. Epub 2015 Dec 14. Bioinformatics. 2016. PMID: 26668003 Free article.
Graphlet-based Characterization of Directed Networks.
Sarajlić A, Malod-Dognin N, Yaveroğlu ÖN, Pržulj N. Sarajlić A, et al. Sci Rep. 2016 Oct 13;6:35098. doi: 10.1038/srep35098. Sci Rep. 2016. PMID: 27734973 Free PMC article.
37 results