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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.
Cox J, Mann M. Cox J, et al. Nat Biotechnol. 2008 Dec;26(12):1367-72. doi: 10.1038/nbt.1511. Epub 2008 Nov 30. Nat Biotechnol. 2008. PMID: 19029910
Using correlation analysis and graph theory, MaxQuant detects peaks, isotope clusters and stable amino acid isotope-labeled (SILAC) peptide pairs as three-dimensional objects in m/z, elution time and signal intensity space. ...
Using correlation analysis and graph theory, MaxQuant detects peaks, isotope clusters and stable amino acid isotope-labeled (SILAC) peptide …
Proteome-wide analysis of chaperonin-dependent protein folding in Escherichia coli.
Kerner MJ, Naylor DJ, Ishihama Y, Maier T, Chang HC, Stines AP, Georgopoulos C, Frishman D, Hayer-Hartl M, Mann M, Hartl FU. Kerner MJ, et al. Cell. 2005 Jul 29;122(2):209-20. doi: 10.1016/j.cell.2005.05.028. Cell. 2005. PMID: 16051146
In-depth analysis of the membrane and cytosolic proteome of red blood cells.
Pasini EM, Kirkegaard M, Mortensen P, Lutz HU, Thomas AW, Mann M. Pasini EM, et al. Blood. 2006 Aug 1;108(3):791-801. doi: 10.1182/blood-2005-11-007799. Blood. 2006. PMID: 16861337
Organellar proteomics: turning inventories into insights.
Andersen JS, Mann M. Andersen JS, et al. EMBO Rep. 2006 Sep;7(9):874-9. doi: 10.1038/sj.embor.7400780. EMBO Rep. 2006. PMID: 16953200 Free PMC article. Review.
MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes.
Zhang Y, Zhang Y, Adachi J, Olsen JV, Shi R, de Souza G, Pasini E, Foster LJ, Macek B, Zougman A, Kumar C, Wisniewski JR, Jun W, Mann M. Zhang Y, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D771-9. doi: 10.1093/nar/gkl784. Epub 2006 Nov 7. Nucleic Acids Res. 2007. PMID: 17090601 Free PMC article.
Phosphoproteins of the chicken eggshell calcified layer.
Mann K, Olsen JV, Macek B, Gnad F, Mann M. Mann K, et al. Proteomics. 2007 Jan;7(1):106-15. doi: 10.1002/pmic.200600635. Proteomics. 2007. PMID: 17152097
The low molecular weight proteome of Halobacterium salinarum.
Klein C, Aivaliotis M, Olsen JV, Falb M, Besir H, Scheffer B, Bisle B, Tebbe A, Konstantinidis K, Siedler F, Pfeiffer F, Mann M, Oesterhelt D. Klein C, et al. J Proteome Res. 2007 Apr;6(4):1510-8. doi: 10.1021/pr060634q. Epub 2007 Feb 28. J Proteome Res. 2007. PMID: 17326674
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