Marco D'Abramo - Search Results

Year	Number of Results
2005	4
2006	1
2008	1
2009	6
2010	4
2011	3
2012	2
2013	3
2014	4
2015	5
2016	4
2017	2
2018	7
2019	6
2020	5
2021	5
2022	15
2023	8
2024	9
2025	4
2026	1

1

Assessing Molecular Dynamics in Predicting Aptamer-Ligand Binding Thermodynamics: Insights from the OTA Binding Aptamers.

Olivieri A, Borzelli F, Giustini M, D'Abramo M. Olivieri A, et al. Among authors: d abramo m. J Chem Inf Model. 2026 Apr 3. doi: 10.1021/acs.jcim.5c02643. Online ahead of print. J Chem Inf Model. 2026. PMID: 41930452

2

Mechanism-Driven Features Enable Asn Deamidation Reactivity Prediction via Machine Learning Methods.

De Sciscio ML, De Troia R, Kervadec J, Centola F, Saporiti S, Priault M, D'Abramo M. De Sciscio ML, et al. Among authors: d abramo m. J Chem Inf Model. 2025 Oct 13;65(19):10588-10599. doi: 10.1021/acs.jcim.5c01386. Epub 2025 Sep 19. J Chem Inf Model. 2025. PMID: 40971455 Free PMC article.

3

Theoretical Modeling of the Redox Thermodynamics of Nucleic Acid Building Blocks in the Condensed Phase.

Olivieri A, Nardi AN, D'Abramo M. Olivieri A, et al. Among authors: d abramo m. J Phys Chem B. 2025 Sep 25;129(38):9578-9587. doi: 10.1021/acs.jpcb.5c03817. Epub 2025 Aug 29. J Phys Chem B. 2025. PMID: 40878658 Free PMC article.

4

Dissecting Methionine Oxidation by Hydrogen Peroxide in Proteins: Thermodynamics, Kinetics, and Susceptibility Descriptors.

De Sciscio ML, Centola F, Saporiti S, D'Abramo M. De Sciscio ML, et al. Among authors: d abramo m. J Chem Inf Model. 2025 Jan 27;65(2):749-761. doi: 10.1021/acs.jcim.4c01617. Epub 2025 Jan 6. J Chem Inf Model. 2025. PMID: 39763136

5

Modulating Charge Transfer Kinetics along Poly Adenine: Chemical Modifications, Temperature, and Conformational Effects.

Nardi AN, De Marco J, D'Abramo M. Nardi AN, et al. Among authors: d abramo m. J Chem Theory Comput. 2025 Jan 28;21(2):530-538. doi: 10.1021/acs.jctc.4c01338. Epub 2025 Jan 3. J Chem Theory Comput. 2025. PMID: 39753378

6

Theoretical Insights into MutY Glycosylase DNA Repair Mechanism.

Olivieri A, Nardi AN, D'Abramo M. Olivieri A, et al. Among authors: d abramo m. Biochemistry. 2024 Aug 6;63(15):1991-1998. doi: 10.1021/acs.biochem.4c00153. Epub 2024 Jul 11. Biochemistry. 2024. PMID: 38990758

7

Binding of steroid substrates reveals the key to the productive transition of the cytochrome P450 OleP.

Costanzo A, Fata F, Freda I, De Sciscio ML, Gugole E, Bulfaro G, Di Renzo M, Barbizzi L, Exertier C, Parisi G, D'Abramo M, Vallone B, Savino C, Montemiglio LC. Costanzo A, et al. Among authors: d abramo m. Structure. 2024 Sep 5;32(9):1465-1476.e3. doi: 10.1016/j.str.2024.06.005. Epub 2024 Jul 5. Structure. 2024. PMID: 38971159 Free article.

8

Supramolecular citrate poly allylamine hydrochloride nanoparticles for citrate delivery and calcium oxalate nanocrystal dissolution.

Gianvincenzo PD, Leyes MF, Boonkam K, Puentes AF, Reyes SG, Nardi AN, Olivieri A, Pummarin S, Kamonsutthipaijit N, Amenitsch H, Ritacco H, D'Abramo M, Ortore MG, Boonla C, Moya SE. Gianvincenzo PD, et al. Among authors: d abramo m. J Colloid Interface Sci. 2024 Sep;669:667-678. doi: 10.1016/j.jcis.2024.04.185. Epub 2024 Apr 30. J Colloid Interface Sci. 2024. PMID: 38733878

9

A finely balanced order-disorder equilibrium sculpts the folding-binding landscape of an antibiotic sequestering protein.

Natarajan L, De Sciscio ML, Nardi AN, Sekhar A, Del Giudice A, D'Abramo M, Naganathan AN. Natarajan L, et al. Among authors: d abramo m. Proc Natl Acad Sci U S A. 2024 May 14;121(20):e2318855121. doi: 10.1073/pnas.2318855121. Epub 2024 May 6. Proc Natl Acad Sci U S A. 2024. PMID: 38709926 Free PMC article.

10

Conformational and dynamic properties of the KH1 domain of FMRP and its fragile X syndrome linked G266E variant.

Catalano F, Santorelli D, Astegno A, Favretto F, D'Abramo M, Del Giudice A, De Sciscio ML, Troilo F, Giardina G, Di Matteo A, Travaglini-Allocatelli C. Catalano F, et al. Among authors: d abramo m. Biochim Biophys Acta Proteins Proteom. 2024 Jul 1;1872(4):141019. doi: 10.1016/j.bbapap.2024.141019. Epub 2024 Apr 17. Biochim Biophys Acta Proteins Proteom. 2024. PMID: 38641086 Free article.

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