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Compilation of E. coli mRNA promoter sequences.
Lisser S, Margalit H. Lisser S, et al. Nucleic Acids Res. 1993 Apr 11;21(7):1507-16. doi: 10.1093/nar/21.7.1507. Nucleic Acids Res. 1993. PMID: 8479900 Free PMC article.
Post-transcriptional 3ยด-UTR cleavage of mRNA transcripts generates thousands of stable uncapped autonomous RNA fragments.
Malka Y, Steiman-Shimony A, Rosenthal E, Argaman L, Cohen-Daniel L, Arbib E, Margalit H, Kaplan T, Berger M. Malka Y, et al. Among authors: margalit h. Nat Commun. 2017 Dec 11;8(1):2029. doi: 10.1038/s41467-017-02099-7. Nat Commun. 2017. PMID: 29229900 Free PMC article.
Global regulation of transcription by a small RNA: a quantitative view.
Nitzan M, Wassarman KM, Biham O, Margalit H. Nitzan M, et al. Biophys J. 2014 Mar 4;106(5):1205-14. doi: 10.1016/j.bpj.2014.01.025. Biophys J. 2014. PMID: 24606944 Free PMC article.
In vivo cleavage rules and target repertoire of RNase III in Escherichia coli.
Altuvia Y, Bar A, Reiss N, Karavani E, Argaman L, Margalit H. Altuvia Y, et al. Among authors: margalit h. Nucleic Acids Res. 2018 Nov 2;46(19):10530-10531. doi: 10.1093/nar/gky816. Nucleic Acids Res. 2018. PMID: 30184218 Free PMC article. No abstract available.
A defense-offense multi-layered regulatory switch in a pathogenic bacterium.
Nitzan M, Fechter P, Peer A, Altuvia Y, Bronesky D, Vandenesch F, Romby P, Biham O, Margalit H. Nitzan M, et al. Nucleic Acids Res. 2015 Feb 18;43(3):1357-69. doi: 10.1093/nar/gkv001. Epub 2015 Jan 27. Nucleic Acids Res. 2015. PMID: 25628364 Free PMC article.
RepTar: a database of predicted cellular targets of host and viral miRNAs.
Elefant N, Berger A, Shein H, Hofree M, Margalit H, Altuvia Y. Elefant N, et al. Nucleic Acids Res. 2011 Jan;39(Database issue):D188-94. doi: 10.1093/nar/gkq1233. Epub 2010 Dec 10. Nucleic Acids Res. 2011. PMID: 21149264 Free PMC article.
Stochastic analysis of bistability in coherent mixed feedback loops combining transcriptional and posttranscriptional regulations.
Nitzan M, Shimoni Y, Rosolio O, Margalit H, Biham O. Nitzan M, et al. Among authors: margalit h. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 May;91(5):052706. doi: 10.1103/PhysRevE.91.052706. Epub 2015 May 15. Phys Rev E Stat Nonlin Soft Matter Phys. 2015. PMID: 26066198
Stochastic analysis of the SOS response in Escherichia coli.
Shimoni Y, Altuvia S, Margalit H, Biham O. Shimoni Y, et al. PLoS One. 2009;4(5):e5363. doi: 10.1371/journal.pone.0005363. Epub 2009 May 8. PLoS One. 2009. PMID: 19424504 Free PMC article.
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