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Comparative genome analysis in the integrated microbial genomes (IMG) system.
Markowitz VM, Kyrpides NC. Markowitz VM, et al. Methods Mol Biol. 2007;395:35-56. doi: 10.1007/978-1-59745-514-5_3. Methods Mol Biol. 2007. PMID: 17993666
High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain.
Osman WAM, van Berkum P, León-Barrios M, Velázquez E, Elia P, Tian R, Ardley J, Gollagher M, Seshadri R, Reddy TBK, Ivanova N, Woyke T, Pati A, Markowitz V, Baeshen MN, Baeshen NN, Kyrpides N, Reeve W. Osman WAM, et al. Among authors: markowitz v. Stand Genomic Sci. 2017 Sep 25;12:58. doi: 10.1186/s40793-017-0270-2. eCollection 2017. Stand Genomic Sci. 2017. PMID: 28975015 Free PMC article.
High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India.
Gehlot HS, Ardley J, Tak N, Tian R, Poonar N, Meghwal RR, Rathi S, Tiwari R, Adnawani W, Seshadri R, Reddy TB, Pati A, Woyke T, Pillay M, Markowitz V, Baeshen MN, Al-Hejin AM, Ivanova N, Kyrpides N, Reeve W. Gehlot HS, et al. Among authors: markowitz v. Stand Genomic Sci. 2016 Jun 23;11:43. doi: 10.1186/s40793-016-0157-7. eCollection 2016. Stand Genomic Sci. 2016. PMID: 27340511 Free PMC article.
High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods.
Aizenberg-Gershtein Y, Izhaki I, Lapidus A, Copeland A, Reddy T, Huntemann M, Pillay M, Markowitz V, Göker M, Woyke T, Klenk HP, Kyrpides NC, Halpern M. Aizenberg-Gershtein Y, et al. Among authors: markowitz v. Stand Genomic Sci. 2016 Jan 13;11:4. doi: 10.1186/s40793-015-0127-5. eCollection 2016. Stand Genomic Sci. 2016. PMID: 26767091 Free PMC article.
High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil.
Ardley J, Tian R, O'Hara G, Seshadri R, Reddy TB, Pati A, Woyke T, Markowitz V, Ivanova N, Kyrpides N, Howieson J, Reeve W. Ardley J, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 Dec 10;10:126. doi: 10.1186/s40793-015-0119-5. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26664655 Free PMC article.
Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos.
Tiwari R, Howieson J, Yates R, Tian R, Held B, Tapia R, Han C, Seshadri R, Reddy TB, Huntemann M, Pati A, Woyke T, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Tiwari R, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 Nov 30;10:113. doi: 10.1186/s40793-015-0115-9. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26629308 Free PMC article.
High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris.
Mhamdi R, Ardley J, Tian R, Seshadri R, Reddy TB, Pati A, Woyke T, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Mhamdi R, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 Jul 2;10:34. doi: 10.1186/s40793-015-0005-1. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26380038 Free PMC article.
High quality draft genome sequence of Brachymonas chironomi AIMA4(T) (DSM 19884(T)) isolated from a Chironomus sp. egg mass.
Laviad S, Lapidus A, Han J, Haynes M, Reddy T, Huntemann M, Pati A, Ivanova NN, Mavromatis K, Lang E, Rohde M, Markowitz V, Woyke T, Klenk HP, Kyrpides NC, Halpern M. Laviad S, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 May 27;10:29. doi: 10.1186/s40793-015-0010-4. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26203340 Free PMC article.
High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama.
Tian R, Parker M, Seshadri R, Reddy T, Markowitz V, Ivanova N, Pati A, Woyke T, Baeshen MN, Baeshen NA, Kyrpides N, Reeve W. Tian R, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 May 17;10:27. doi: 10.1186/s40793-015-0006-0. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26203338 Free PMC article.
High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York.
Tian R, Parker M, Seshadri R, Reddy T, Markowitz V, Ivanova N, Pati A, Woyke T, Baeshen MN, Baeshen NA, Kyrpides N, Reeve W. Tian R, et al. Among authors: markowitz v. Stand Genomic Sci. 2015 May 16;10:24. doi: 10.1186/s40793-015-0008-y. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26203336 Free PMC article.
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