Marra NJ - Search Results

1

High-Quality Reference Genome for an Arid-Adapted Mammal, the Banner-Tailed Kangaroo Rat (Dipodomys spectabilis).

Harder AM, Walden KKO, Marra NJ, Willoughby JR. Harder AM, et al. Among authors: marra nj. Genome Biol Evol. 2022 Jan 4;14(1):evac005. doi: 10.1093/gbe/evac005. Genome Biol Evol. 2022. PMID: 35026029 Free PMC article.

2

Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys spectabilis).

Doyle JM, Siegmund G, Ruhl JD, Eo SH, Hale MC, Marra NJ, Waser PM, Dewoody JA. Doyle JM, et al. Among authors: marra nj. Genome. 2013 Jul;56(7):407-14. doi: 10.1139/gen-2013-0056. Epub 2013 Aug 20. Genome. 2013. PMID: 24099393

3

Of contigs and quagmires: next-generation sequencing pitfalls associated with transcriptomic studies.

DeWoody JA, Abts KC, Fahey AL, Ji Y, Kimble SJ, Marra NJ, Wijayawardena BK, Willoughby JR. DeWoody JA, et al. Among authors: marra nj. Mol Ecol Resour. 2013 Jul;13(4):551-8. doi: 10.1111/1755-0998.12107. Epub 2013 Apr 25. Mol Ecol Resour. 2013. PMID: 23615313 Review.

4

A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat).

Marra NJ, Eo SH, Hale MC, Waser PM, DeWoody JA. Marra NJ, et al. Comp Biochem Physiol Part D Genomics Proteomics. 2012 Dec;7(4):328-39. doi: 10.1016/j.cbd.2012.07.001. Epub 2012 Jul 13. Comp Biochem Physiol Part D Genomics Proteomics. 2012. PMID: 22841684

5

Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq.

Marra NJ, Romero A, DeWoody JA. Marra NJ, et al. Mol Ecol. 2014 Jun;23(11):2699-711. doi: 10.1111/mec.12764. Epub 2014 May 16. Mol Ecol. 2014. PMID: 24754676

6

Comparative analysis of active retrotransposons in the transcriptomes of three species of heteromyid rodents.

Ji Y, Marra NJ, DeWoody JA. Ji Y, et al. Among authors: marra nj. Gene. 2015 May 10;562(1):95-106. doi: 10.1016/j.gene.2015.02.058. Epub 2015 Feb 20. Gene. 2015. PMID: 25704534

7

Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing.

Eo SH, Doyle JM, Hale MC, Marra NJ, Ruhl JD, DeWoody JA. Eo SH, et al. Among authors: marra nj. Gene. 2012 Jan 25;492(2):329-38. doi: 10.1016/j.gene.2011.11.018. Epub 2011 Nov 23. Gene. 2012. PMID: 22138480

8

Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents.

Marra NJ, DeWoody JA. Marra NJ, et al. BMC Genomics. 2014 Oct 24;15(1):929. doi: 10.1186/1471-2164-15-929. BMC Genomics. 2014. PMID: 25341737 Free PMC article.

9

Comparative transcriptomics of elasmobranchs and teleosts highlight important processes in adaptive immunity and regional endothermy.

Marra NJ, Richards VP, Early A, Bogdanowicz SM, Pavinski Bitar PD, Stanhope MJ, Shivji MS. Marra NJ, et al. BMC Genomics. 2017 Jan 30;18(1):87. doi: 10.1186/s12864-016-3411-x. BMC Genomics. 2017. PMID: 28132643 Free PMC article.

10

The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus.

Gorman J, Marra N, Shivji MS, Stanhope MJ. Gorman J, et al. Mitochondrial DNA B Resour. 2019 Oct 18;4(2):3642-3643. doi: 10.1080/23802359.2019.1677524. Mitochondrial DNA B Resour. 2019. PMID: 33366122 Free PMC article.

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