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DBAli tools: mining the protein structure space.
Marti-Renom MA, Pieper U, Madhusudhan MS, Rossi A, Eswar N, Davis FP, Al-Shahrour F, Dopazo J, Sali A. Marti-Renom MA, et al. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W393-7. doi: 10.1093/nar/gkm236. Epub 2007 May 3. Nucleic Acids Res. 2007. PMID: 17478513 Free PMC article.
Comparative protein structure modeling using Modeller.
Eswar N, Webb B, Marti-Renom MA, Madhusudhan MS, Eramian D, Shen MY, Pieper U, Sali A. Eswar N, et al. Curr Protoc Bioinformatics. 2006 Oct;Chapter 5:Unit-5.6. doi: 10.1002/0471250953.bi0506s15. Curr Protoc Bioinformatics. 2006. PMID: 18428767 Free PMC article.
A kernel for open source drug discovery in tropical diseases.
Ortí L, Carbajo RJ, Pieper U, Eswar N, Maurer SM, Rai AK, Taylor G, Todd MH, Pineda-Lucena A, Sali A, Marti-Renom MA. Ortí L, et al. PLoS Negl Trop Dis. 2009;3(4):e418. doi: 10.1371/journal.pntd.0000418. Epub 2009 Apr 21. PLoS Negl Trop Dis. 2009. PMID: 19381286 Free PMC article.
DBAli: a database of protein structure alignments.
Martí-Renom MA, Ilyin VA, Sali A. Martí-Renom MA, et al. Bioinformatics. 2001 Aug;17(8):746-7. doi: 10.1093/bioinformatics/17.8.746. Bioinformatics. 2001. PMID: 11524379
Tools for comparative protein structure modeling and analysis.
Eswar N, John B, Mirkovic N, Fiser A, Ilyin VA, Pieper U, Stuart AC, Marti-Renom MA, Madhusudhan MS, Yerkovich B, Sali A. Eswar N, et al. Nucleic Acids Res. 2003 Jul 1;31(13):3375-80. doi: 10.1093/nar/gkg543. Nucleic Acids Res. 2003. PMID: 12824331 Free PMC article.
125 results