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Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida.
Leprince A, de Lorenzo V, Völler P, van Passel MW, Martins dos Santos VA. Leprince A, et al. Among authors: martins dos santos va. Environ Microbiol. 2012 Jun;14(6):1444-53. doi: 10.1111/j.1462-2920.2012.02730.x. Epub 2012 Mar 19. Environ Microbiol. 2012. PMID: 22429517 Free PMC article.
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.
Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, Fouts DE, Gill SR, Pop M, Holmes M, Brinkac L, Beanan M, DeBoy RT, Daugherty S, Kolonay J, Madupu R, Nelson W, White O, Peterson J, Khouri H, Hance I, Chris Lee P, Holtzapple E, Scanlan D, Tran K, Moazzez A, Utterback T, Rizzo M, Lee K, Kosack D, Moestl D, Wedler H, Lauber J, Stjepandic D, Hoheisel J, Straetz M, Heim S, Kiewitz C, Eisen JA, Timmis KN, Düsterhöft A, Tümmler B, Fraser CM. Nelson KE, et al. Among authors: martins dos santos va. Environ Microbiol. 2002 Dec;4(12):799-808. doi: 10.1046/j.1462-2920.2002.00366.x. Environ Microbiol. 2002. PMID: 12534463
Genomic and mechanistic insights into the biodegradation of organic pollutants.
Pieper DH, Martins dos Santos VA, Golyshin PN. Pieper DH, et al. Among authors: martins dos santos va. Curr Opin Biotechnol. 2004 Jun;15(3):215-24. doi: 10.1016/j.copbio.2004.03.008. Curr Opin Biotechnol. 2004. PMID: 15193329 Review.
Dynamics of reductive genome evolution in mitochondria and obligate intracellular microbes.
Khachane AN, Timmis KN, Martins dos Santos VA. Khachane AN, et al. Among authors: martins dos santos va. Mol Biol Evol. 2007 Feb;24(2):449-56. doi: 10.1093/molbev/msl174. Epub 2006 Nov 15. Mol Biol Evol. 2007. PMID: 17108184
Towards understanding Pseudomonas aeruginosa burn wound infections by profiling gene expression.
Bielecki P, Glik J, Kawecki M, Martins dos Santos VA. Bielecki P, et al. Among authors: martins dos santos va. Biotechnol Lett. 2008 May;30(5):777-90. doi: 10.1007/s10529-007-9620-2. Epub 2007 Dec 26. Biotechnol Lett. 2008. PMID: 18158583 Review.
Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology.
Puchałka J, Oberhardt MA, Godinho M, Bielecka A, Regenhardt D, Timmis KN, Papin JA, Martins dos Santos VA. Puchałka J, et al. Among authors: martins dos santos va. PLoS Comput Biol. 2008 Oct;4(10):e1000210. doi: 10.1371/journal.pcbi.1000210. Epub 2008 Oct 31. PLoS Comput Biol. 2008. PMID: 18974823 Free PMC article.
Linking genes to microbial growth kinetics: an integrated biochemical systems engineering approach.
Koutinas M, Kiparissides A, Silva-Rocha R, Lam MC, Martins Dos Santos VA, de Lorenzo V, Pistikopoulos EN, Mantalaris A. Koutinas M, et al. Among authors: martins dos santos va. Metab Eng. 2011 Jul;13(4):401-13. doi: 10.1016/j.ymben.2011.02.001. Epub 2011 Feb 16. Metab Eng. 2011. PMID: 21315172
The metabolic response of P. putida KT2442 producing high levels of polyhydroxyalkanoate under single- and multiple-nutrient-limited growth: highlights from a multi-level omics approach.
Poblete-Castro I, Escapa IF, Jäger C, Puchalka J, Lam CM, Schomburg D, Prieto MA, Martins dos Santos VA. Poblete-Castro I, et al. Among authors: martins dos santos va. Microb Cell Fact. 2012 Mar 20;11:34. doi: 10.1186/1475-2859-11-34. Microb Cell Fact. 2012. PMID: 22433058 Free PMC article.
Ex vivo transcriptional profiling reveals a common set of genes important for the adaptation of Pseudomonas aeruginosa to chronically infected host sites.
Bielecki P, Komor U, Bielecka A, Müsken M, Puchałka J, Pletz MW, Ballmann M, Martins dos Santos VA, Weiss S, Häussler S. Bielecki P, et al. Among authors: martins dos santos va. Environ Microbiol. 2013 Feb;15(2):570-87. doi: 10.1111/1462-2920.12024. Epub 2012 Nov 12. Environ Microbiol. 2013. PMID: 23145907
In-silico-driven metabolic engineering of Pseudomonas putida for enhanced production of poly-hydroxyalkanoates.
Poblete-Castro I, Binger D, Rodrigues A, Becker J, Martins Dos Santos VA, Wittmann C. Poblete-Castro I, et al. Among authors: martins dos santos va. Metab Eng. 2013 Jan;15:113-23. doi: 10.1016/j.ymben.2012.10.004. Epub 2012 Nov 17. Metab Eng. 2013. PMID: 23164576
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