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108 results
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Transfer of rye chromosome segments to wheat by a gametocidal system.
Masoudi-Nejad A, Nasuda S, McIntosh RA, Endo TR. Masoudi-Nejad A, et al. Chromosome Res. 2002;10(5):349-57. doi: 10.1023/a:1016845200960. Chromosome Res. 2002. PMID: 12296517
Molecular cloning, sequencing, and chromosome mapping of a 1A-encoded omega-type prolamin sequence from wheat.
Masoudi-Nejad A, Nasuda S, Kawabe A, Endo TR. Masoudi-Nejad A, et al. Genome. 2002 Aug;45(4):661-9. doi: 10.1139/g02-030. Genome. 2002. PMID: 12175069
An alternative to radiation hybrid mapping for large-scale genome analysis in barley.
Masoudi-Nejad A, Nasuda S, Bihoreau MT, Waugh R, Endo TR. Masoudi-Nejad A, et al. Mol Genet Genomics. 2005 Dec;274(6):589-94. doi: 10.1007/s00438-005-0052-1. Epub 2005 Oct 18. Mol Genet Genomics. 2005. PMID: 16231150
Dissection of rye chromosome 1R in common wheat.
Tsuchida M, Fukushima T, Nasuda S, Masoudi-Nejad A, Ishikawa G, Nakamura T, Endo TR. Tsuchida M, et al. Genes Genet Syst. 2008 Feb;83(1):43-53. doi: 10.1266/ggs.83.43. Genes Genet Syst. 2008. PMID: 18379133
KEGG bioinformatics resource for plant genomics research.
Masoudi-Nejad A, Goto S, Endo TR, Kanehisa M. Masoudi-Nejad A, et al. Methods Mol Biol. 2007;406:437-58. doi: 10.1007/978-1-59745-535-0_21. Methods Mol Biol. 2007. PMID: 18287706
Genome-scale computational analysis of DNA curvature and repeats in Arabidopsis and rice uncovers plant-specific genomic properties.
Masoudi-Nejad A, Movahedi S, J√°uregui R. Masoudi-Nejad A, et al. BMC Genomics. 2011 May 6;12:214. doi: 10.1186/1471-2164-12-214. BMC Genomics. 2011. PMID: 21548945 Free PMC article.
Predictive genomics: a cancer hallmark network framework for predicting tumor clinical phenotypes using genome sequencing data.
Wang E, Zaman N, Mcgee S, Milanese JS, Masoudi-Nejad A, O'Connor-McCourt M. Wang E, et al. Semin Cancer Biol. 2015 Feb;30:4-12. doi: 10.1016/j.semcancer.2014.04.002. Epub 2014 Apr 18. Semin Cancer Biol. 2015. PMID: 24747696 Review.
Informative Bayesian Model Selection: a method for identifying interactions in genome-wide data.
Aflakparast M, Masoudi-Nejad A, Bozorgmehr JH, Visweswaran S. Aflakparast M, et al. Mol Biosyst. 2014 Oct;10(10):2654-62. doi: 10.1039/c4mb00123k. Mol Biosyst. 2014. PMID: 25070634
EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments.
Masoudi-Nejad A, Tonomura K, Kawashima S, Moriya Y, Suzuki M, Itoh M, Kanehisa M, Endo T, Goto S. Masoudi-Nejad A, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W459-62. doi: 10.1093/nar/gkl066. Nucleic Acids Res. 2006. PMID: 16845049 Free PMC article.
EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG.
Masoudi-Nejad A, Goto S, Jauregui R, Ito M, Kawashima S, Moriya Y, Endo TR, Kanehisa M. Masoudi-Nejad A, et al. Plant Physiol. 2007 Jun;144(2):857-66. doi: 10.1104/pp.106.095059. Epub 2007 Apr 27. Plant Physiol. 2007. PMID: 17468225 Free PMC article.
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